CX300501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.352e-27 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP +++CG+VT+ LAPC+P+L GR P CC GV+ L GAA+T DR+ AC CLK A +I+GI AAGLP CGV IPYKISPSTDCS V+ Sbjct: 15 MVVVAPHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.684e-27 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 3 ILVTAPVTNAI-TCGQVTASLAPCIPFLRTGGRFPPP-PCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L T P A+ TCGQVT +LAPC+ +LR+ P P CC+ VR LN AARTT D++ AC CLK+ + G+ N AAGLP++CGV IPYKISP+TDC+RV Sbjct: 17 VLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.424e-27 Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 16 MVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.424e-27 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 + + A V AITCG V +SL+PC+ +L GG PPPCC+GV+ LNG A+TTPDRQ AC CL+ A +G+ P++A+GLP +CGV IPY IS ST+C+ ++ Sbjct: 15 VFIVASVDAAITCGTVASSLSPCLGYLSKGG-VVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSA---AKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.696e-27 Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS +T+C+ V+ Sbjct: 16 MVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.160e-26 Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 6 LVTAPVT-NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 +V AP+ +AITCG+V +LAPC+ +L+ GG P CC GVR+LN AA TTPDRQAACNCLK A G+I + N AA LP +C V IPYKIS ST+C+ +R Sbjct: 15 IVIAPMAESAITCGRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.160e-26 Identity = 57/102 (55.88%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP A+TCGQVT++LAPC+P+L G P CC GV+ L G A+TT DRQ AC CLK A + G+ AA LPS C V IPYKISPSTDCS+V+ Sbjct: 15 MVVVAPHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.812e-26 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 6 LVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++ AP+ AI+CG VT L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNC+K A +I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 16 MIVAPMAEGAISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.812e-26 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 ++V A T+ AI+CGQV++++A C+ + R G P CCSGVRSLN AARTT DR+AACNCLK A I G+ AA +PS+CGV +PY IS STDCSRV Sbjct: 15 VVVLAATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.285e-26 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ P T AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 16 LLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117 The following BLAST results are available for this feature:
BLAST of CX300501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300501 ID=CX300501; Name=CX300501; organism=Citrus clementina; type=EST; length=392bpback to top |