CX300501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.471e-22 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 ++CG V LAPCI +LR+ G P CC+GV++L +A TT DR+ AC CL A +I G+ +AAGLP +CGV IPYKISPST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22 Identity = 55/104 (52.88%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 +LV AP+ AI+ QV +SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K I I VAAGLP QC V IPYKISPS DC RV+ Sbjct: 17 LLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.191e-22 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+T+ A++CG V+ +APCI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 15 MIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.732e-21 Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 ++CG V +A CI +LR G P CC+GV++L +A TT DR+ AC CL A TI G+ +AAGLP++CGV IPYKISPST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.732e-21 Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+ A++CG V+ +LA CI +L G P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 15 MIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.569e-21 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 3 ILVTAPVT--NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+T A+TCG V +++APCI ++ GG P CC+GV LN ARTTPDRQ AC CL+ A R + PN+ AAG+P CGV +P+ IS +T+C+ V+ Sbjct: 15 MIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.661e-21 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AITCGQV+++L PC + + G P CCSGV+ L G AR+T D+QA C CLK G + AAG+PS+CGV +PY IS S DCS++ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.087e-21 Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 15 MIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.950e-21 Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 15 MIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of CX300501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300501 ID=CX300501; Name=CX300501; organism=Citrus clementina; type=EST; length=392bpback to top |