CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEOUR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=kdsB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.041e-31 Identity = 71/154 (46.10%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 ++ IIPAR+AS+RFEGK L +I+GKPM+Q +ER+ A+ + ++VATDDE+IA FG MTS GT+R E +L+ DI+VN+QGDEPLIEP +ID +K L + T T +K D PN VK V D GYA+Y Sbjct: 2 KITAIIPARYASTRFEGKALADIMGKPMVQHVYERTAKASLVSEVIVATDDERIAAAVHAFGGRAEMTSRVHETGTDRLAEVAARLDS--DIIVNVQGDEPLIEPAMIDEAIKPLAEDSSVMMGTLKTRIKTLHDFLSPNVVKVVTDWEGYALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PARUW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=kdsB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.847e-31 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIY 585 +++GIIPAR+ S+RF GKPL +ILGK ++QRT+E S A+ L L+VATDDE+I E + F V+MTSE C GT+R E L + +VNIQGDEP + P I+ V+AL P ST VT L E+A + + VKCV+D G A+Y Sbjct: 9 QIIGIIPARYGSTRFPGKPLASILGKTLLQRTYENSLRASALSDLIVATDDERIFEHVRSFNGKVVMTSEQCPTGTDRLAEVLSLYPEWMHATAIVNIQGDEPCLNPLTINLAVQALVNDPQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALY 164
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PARD8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=kdsB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.847e-31 Identity = 72/158 (45.57%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIY 585 + +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I + FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A + +T V + +D F+PN K V++ + A+Y Sbjct: 3 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKAFGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADANTQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=kdsB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.155e-30 Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +++G+IPAR+ASSRF GKPLV I K MI+ T+ + +T L LVVATDD +I E Q FG + +MT +GT+R E + L +Y I++NIQGDEP IEPE+IDGV + P+ STA L DPNRVK ++D +G AIY Sbjct: 3 KILGVIPARYASSRFPGKPLVKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHEVVQGFGGNSVMTRADHISGTDRIIE-VANLFSEYSIIINIQGDEPGIEPELIDGVAGLKASHPEWKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=kdsB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.155e-30 Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +++G+IPAR+ASSRF GKPLV I K MI+ T+ + +T L LVVATDD +I E Q FG + +MT +GT+R E + L +Y I++NIQGDEP IEPE+IDGV + P+ STA L DPNRVK ++D +G AIY Sbjct: 3 KILGVIPARYASSRFPGKPLVKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHEVVQGFGGNSVMTRADHISGTDRIIE-VANLFSEYSIIINIQGDEPGIEPELIDGVAGLKASHPEWKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_DESAA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=kdsB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.155e-30 Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +VV IIPAR+ S+RFE KPL I GKPMIQR +ER+ A+++ + VATDDE+I ++FG +MTS++CR+GT+R EA + L DIVVN+QGD+P+ +PE ID V L P +T A + + DP VK V D G+A+Y Sbjct: 2 KVVVIIPARYGSTRFEAKPLALIAGKPMIQRVYERAAAASSVTGVAVATDDERIVSAVEKFGGKAVMTSDACRSGTDRVFEAGRTLGLTGSDIVVNVQGDQPVFDPECIDEVTAPLIGDPGTGMTTLAFAIVNEREMTDPKDVKMVFDQDGWALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans GN=kdsB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.509e-30 Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+ ST AV L A D NRVK ++D +G AIY Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQKFGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=kdsB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.509e-30 Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+ ST AV L A D NRVK ++D +G AIY Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQKFGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SYNFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=kdsB PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.574e-30 Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 R+VGIIPAR+ SSRF GKPLV+ILGKPMI+ +ERS A LD L+VATDD +IA FG + ++T +GT+R EA + LE DIVVNIQGDEPL+ +I+ +V+ALQ +T A S +D +PN VK V+D A+Y Sbjct: 2 RIVGIIPARYQSSRFPGKPLVDILGKPMIRHVYERSARAGCLDRLIVATDDARIAAAVAGFGGEALLTRADHASGTDRLAEAARLLELDGADIVVNIQGDEPLVNHRMIEALVEALQCDRHCPMATLAFPSESLQDYNNPNVVKVVLDRGLRALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLAB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydophila abortus GN=kdsB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.391e-30 Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1 Query: 112 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 + F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I + FG +MTS C NGTER E + + + +I+VNIQGDEP + ++D +V+ L+ P+ T V + + +VKCV D +G A+Y Sbjct: 4 QTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIMDHVLDFGGACLMTSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKLEEHPEIQMVTPVAQTTDSHEILTNQKVKCVFDKNGKALY 162 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |