CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERPN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERPG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERPE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pestis GN=kdsB PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERPB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERP3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ D ++VATD + + + G +V +T ++GTER E ++ DI+VN+QGDEPL+ P II V L A + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRAP2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R GK L +I GKPMIQR +E+ + +++ATD ++I E + FGA VI+T + +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P+AV ST + + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEQVA-KSKFKSIIIATDSQEIKEVAENFGAKVILTRDDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPVENIEQAAQLLIEKPEAVVSTLCERITEAEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEHH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDDE+I + FG V+MT +GT+R ++A+ +L D+V+N+QGD+PLI+P I+ +V + P F A ++ D DPN VK V DN+ A+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLKDIYVATDDERIKNAVEGFGGKVVMTGADAASGTDRIDDAITQLGLADDDLVINLQGDQPLIDPISIEQLVSLCERHP-GEFDMATLGVEIRDEAQINDPNHVKMVFDNNFNALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BACV8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=kdsB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26 Identity = 68/157 (43.31%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIY 585 + +GIIPAR+AS+RF KPL + GKP+IQR +E+ ++ LD VATDDE+I + FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ VKA P +T V P+D + N K VV + A+Y Sbjct: 2 KFIGIIPARYASTRFPAKPLAVLGGKPVIQRVYEQ--VSGILDEAYVATDDERIESAVKAFGGKVVMTSVHHKSGTDRCYEAYTKVGRGYDVVVNIQGDEPFIQKSQLE-AVKACFEDPATQIATLVKPFIPDDGLEALENVNSPKVVVGKNMNALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_YERE8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=kdsB PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.847e-26 Identity = 64/152 (42.11%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 + IIPAR+AS+R GKPL +I GKPM+ ER+ L + ++VATD ++ + G +V +T ++GTER E +++ D I+VN+QGDEPL+ PEII V + L A+ + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LESGASQVIVATDHPEVVTAVEAAGGEVCLTRADHQSGTERLAEVIERYGFADDQIIVNVQGDEPLVPPEIIRQVAENLAASSAGMATLAVPIESSEEAFNPNAVKVVMDAQGYALY 154 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |