CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain SE11) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECO8A (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECO55 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECO24 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KPSU5_ECOLX (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli GN=kpsU PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 59/154 (38.31%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P +T ++ +A +P+ VK VV+ A+Y Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_TOLAT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 68/152 (44.74%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V +IPAR+ SSR GKPL +I GKPMI ER+K A ++VA DDE++A G DV MT ++GTER E +K D I+VN+QGDEPLI P II V L + + AV + F+PN VK V+D GYA+Y Sbjct: 4 VVVIPARYQSSRLPGKPLADIHGKPMIAWVVERAKQAGA-SQVIVAVDDERVAAAVSALGVDVCMTGSHHQSGTERLAEVCEKYAFAPDTIIVNVQGDEPLIPPAIITQVADNLANTSAPMATLAVAIEDEHELFNPNAVKVVMDKQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HALHL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 61/151 (40.40%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIY 585 +IPAR+ +SR GKPL ++LG+P++Q + R+ + + +VVATDD +I C+ FGA+V++T+ GT+R E + +L + IVVN+QGDEPL+ PE++ V + L PDA +T T + D F+P+ VK V D+ +A+Y Sbjct: 9 VIPARYGASRLPGKPLADLLGEPVVQHVYRRA-VESGAARVVVATDDARIESACRDFGAEVLLTAPDHPTGTDRIAEVVDRLALVDEAIVVNLQGDEPLMPPELVALVAERLDTDPDAAIATLATPVTAADELFEPSVVKVVRDHRDHALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAEDU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus ducreyi GN=kdsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 64/150 (42.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR GKPL++I G PMIQ W++++ A + +++ATD +I + FGA+V MTS+ ++GTER E + K+ +I+VN+QGDEPLI P I+ V L + + AV E+ F+PN VK V+++ G A+Y Sbjct: 6 IIPARYASSRLPGKPLLDINGYPMIQYVWQKAQQAGA-NRVIIATDHPQIQTVAKAFGAEVCMTSDQHQSGTERLAEVVAKMAIADQEIIVNVQGDEPLIPPIIVQQVATNLDKNGVNMATLAVKLTTREELFNPNVVKTVINDKGMALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 67/152 (44.08%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIY 585 IIPAR S+R K L +I G+P+I RTW ++ +VVATD KIAE +GA+V+MTS R G+ER EA ++ D+VVN+QGDEPLI E ID ++ + ST V L+P+D DPN+VK V++ GYA+Y Sbjct: 6 IIPARLGSTRLPEKMLADIEGEPLIVRTWRQAMQCCRASRVVVATDSVKIAEVLTTYGAEVVMTSPEARCGSERIAEAARQF--ACDVVVNLQGDEPLISHETIDLALEPFFSPNPPDCSTLVFPLQPDDWAQLHDPNQVKVVLNREGYALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |