CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVA-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ENTS8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L +A + + AV ++AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAA-RIIVATDHPDVARAIEAAGGEVCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLASAQAGMATLAVPVHDAQEAFNPNAVKVVMDAQGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BDEBA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bdellovibrio bacteriovorus GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 62/153 (40.52%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 ++VG+IPARF S+RF GKPLVN+ G+P+IQ T E +K + L ++VATD E I + G V+MT G++R N A++ + D+VVNIQGDEPL+ E+ID + + P +T + E+ N VK VV+ A+Y Sbjct: 2 KIVGVIPARFGSTRFPGKPLVNLKGRPLIQWTVEGAKKSKLLSEVIVATDHEGIKAAAEAVGVKVVMTDSDLPTGSDRINAAIK--DVACDVVVNIQGDEPLVTGELIDRLAQVFVDDPKMDMATLAHPISAEELQSMNSVKVVVNCRDEALY 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AZOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Azoarcus sp. (strain EbN1) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 68/151 (45.03%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR ASSR GKPL +I GKPM+ R E+++ A + VATD ++ + + G D +MT E +GT+R E + L K DIVVN+QGDEPLIEP++I V +AL P A +TA L + F+PN VK V D H +A+Y Sbjct: 7 VIPARHASSRLPGKPLADIAGKPMVVRVLEQARRAGAAS-VWVATDHPEVLDAVRAAGGDALMTREDHPSGTDRLAEVVDALGWKADDIVVNVQGDEPLIEPKLIAAVAQALADDPVAAIATAAHPLHAAAELFNPNVVKVVCDAHDHALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PROA2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIY 585 +V +IPAR SSR K L +I G P+I RTW++++ ++ +V+ATD E+IA + GADV+MTS R GTER EA + ++ D+ VN+QGDEPLI+P ID V+K ST V L ED DPN VK V+D+ A+Y Sbjct: 6 IVILIPARLNSSRLPNKMLADIEGAPLIVRTWQQAQQSSLTRQVVIATDSEEIAGVMKACGADVVMTSPDARCGTERIAEAAENIDA--DVFVNLQGDEPLIDPGNIDLVIKPFLQENPPDCSTLVYRLLAEDYAALHDPNIVKVVMDSQSNALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. tularensis GN=kdsB PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRAT1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+Y Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VARPS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Variovorax paradoxus (strain S110) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKK-YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIY 585 ++PAR AS+R KPL +I G PM+ R R+ + +VVA DD I E C + G + I+T + +G++R EA ++L DI+VN+QGDEPLI+P +ID V AL A P+A STA + D F +PN VK V+D G A+Y Sbjct: 6 LVPARLASTRLPNKPLADIAGLPMVVRVARRASQSGAA-RVVVAGDDAAIVEACARHGVEAILTRQDHPSGSDRLAEACEQLGLDGSDIIVNVQGDEPLIDPALIDAVASALAAHPEAAMSTAAHEIDSLDDFLNPNVVKAVLDAQGNALY 155 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |