CX300513

Overview
NameCX300513
Unique NameCX300513
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length586
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585
            +IPAR  S+R   K L +I GKPMIQR +E+    +  D +++ATD +KI +  + FGA V++T +  ++GT+R  EA+ KL     DIVVN+QGDEPLI  E I+   + L    +AV ST    +   ED ++PN VK V D + YA+Y
Sbjct:    7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585
            +IPAR  S+R   K L +I GKPMIQR +E+    +  D +++ATD +KI +  + FGA V++T +  ++GT+R  EA+ KL     DIVVN+QGDEPLI  E I+   + L    +AV ST    +   ED ++PN VK V D + YA+Y
Sbjct:    7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVA-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585
            +IPAR  S+R   K L +I GKPMIQR +E+    +  D +++ATD +KI +  + FGA V++T +  ++GT+R  EA+ KL     DIVVN+QGDEPLI  E I+   + L    +AV ST    +   ED ++PN VK V D + YA+Y
Sbjct:    7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ENTS8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585
            V IIPAR+AS+R  GKPLV+I GKPMI    ER++ +     ++VATD   +A   +  G +V MT    ++GTER  E ++K     D ++VN+QGDEP+I P II  V + L +A   + + AV     ++AF+PN VK V+D  GYA+Y
Sbjct:    4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAA-RIIVATDHPDVARAIEAAGGEVCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLASAQAGMATLAVPVHDAQEAFNPNAVKVVMDAQGYALY 154          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BDEBA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bdellovibrio bacteriovorus GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 62/153 (40.52%), Postives = 90/153 (58.82%), Query Frame = 1
Query:  127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585
            ++VG+IPARF S+RF GKPLVN+ G+P+IQ T E +K +  L  ++VATD E I    +  G  V+MT      G++R N A++  +   D+VVNIQGDEPL+  E+ID + +     P    +T    +  E+    N VK VV+    A+Y
Sbjct:    2 KIVGVIPARFGSTRFPGKPLVNLKGRPLIQWTVEGAKKSKLLSEVIVATDHEGIKAAAEAVGVKVVMTDSDLPTGSDRINAAIK--DVACDVVVNIQGDEPLVTGELIDRLAQVFVDDPKMDMATLAHPISAEELQSMNSVKVVVNCRDEALY 152          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AZOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Azoarcus sp. (strain EbN1) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 68/151 (45.03%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585
            +IPAR ASSR  GKPL +I GKPM+ R  E+++ A     + VATD  ++ +  +  G D +MT E   +GT+R  E +  L  K  DIVVN+QGDEPLIEP++I  V +AL   P A  +TA   L    + F+PN VK V D H +A+Y
Sbjct:    7 VIPARHASSRLPGKPLADIAGKPMVVRVLEQARRAGAAS-VWVATDHPEVLDAVRAAGGDALMTREDHPSGTDRLAEVVDALGWKADDIVVNVQGDEPLIEPKLIAAVAQALADDPVAAIATAAHPLHAAAELFNPNVVKVVCDAHDHALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PROA2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=kdsB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIY 585
            +V +IPAR  SSR   K L +I G P+I RTW++++ ++    +V+ATD E+IA   +  GADV+MTS   R GTER  EA + ++   D+ VN+QGDEPLI+P  ID V+K          ST V  L  ED     DPN VK V+D+   A+Y
Sbjct:    6 IVILIPARLNSSRLPNKMLADIEGAPLIVRTWQQAQQSSLTRQVVIATDSEEIAGVMKACGADVVMTSPDARCGTERIAEAAENIDA--DVFVNLQGDEPLIDPGNIDLVIKPFLQENPPDCSTLVYRLLAEDYAALHDPNIVKVVMDSQSNALY 158          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRATT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. tularensis GN=kdsB PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585
            +IPAR  S+R   K L +I GKPMIQR +E+    +  D +++ATD +KI +  + FGA V++T +  ++GT+R  EA+ KL     DIVVN+QGDEPLI  E I+   + L    +AV ST    +   ED ++PN VK V D + YA+Y
Sbjct:    7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FRAT1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=kdsB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585
            +IPAR  S+R   K L +I GKPMIQR +E+    +  D +++ATD +KI +  + FGA V++T +  ++GT+R  EA+ KL     DIVVN+QGDEPLI  E I+   + L    +AV ST    +   ED ++PN VK V D + YA+Y
Sbjct:    7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALY 156          
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VARPS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Variovorax paradoxus (strain S110) GN=kdsB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1
Query:  139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKK-YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIY 585
            ++PAR AS+R   KPL +I G PM+ R   R+  +     +VVA DD  I E C + G + I+T +   +G++R  EA ++L     DI+VN+QGDEPLI+P +ID V  AL A P+A  STA   +   D F +PN VK V+D  G A+Y
Sbjct:    6 LVPARLASTRLPNKPLADIAGLPMVVRVARRASQSGAA-RVVVAGDDAAIVEACARHGVEAILTRQDHPSGSDRLAEACEQLGLDGSDIIVNVQGDEPLIDPALIDAVASALAAHPEAAMSTAAHEIDSLDDFLNPNVVKAVLDAQGNALY 155          
The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
KDSB_FRATO2.493e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_FRATN2.493e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_FRATF2.493e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_ENTS82.493e-2543.423-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_BDEBA2.493e-2540.523-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_AZOSE2.493e-2545.033-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_PROA23.256e-2543.873-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_FRATT3.256e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_FRAT13.256e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_VARPS4.253e-2543.053-deoxy-manno-octulosonate cytidylyltransferase OS... [more]

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Properties
Property NameValue
Genbank descriptionC07011B01SK SaltLeaf1 Citrus clementina cDNA clone C07011B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bp
GTTCGCCGTCCGAATCTTCTTCCTCAAACAAAGTCGTGGATCGTGCACGG
CATTGTAGCCGGAGCAGCAATTGCTGTTGCCGTCGGTGCGCGCGCCTATC
TGGGTCGATCGAAGAACTTTCGGAGCAGGGTCGTGGGTATCATACCCGCC
CGTTTCGCTTCTTCTCGCTTCGAGGGCAAACCCCTTGTTAATATCCTCGG
TAAACCTATGATCCAGAGAACATGGGAAAGGTCCAAACTGGCAACCACAT
TGGATCACCTGGTTGTGGCAACGGATGATGAGAAGATTGCAGAATGCTGC
CAACAATTTGGTGCTGATGTGATAATGACTTCAGAATCTTGCCGAAATGG
TACTGAAAGATGCAACGAAGCATTACAAAAGCTGGAGAAGAAGTACGATA
TTGTTGTCAATATTCAGGGAGATGAACCTCTTATTGAACCAGAGATTATA
GATGGTGTTGTGAAAGCTCTGCAGGCAGCCCCAGATGCAGTGTTCAGTAC
TGCTGTGACATCTTTAAAACCTGAAGATGCATTTGATCCAAATCGGGTGA
AATGTGTTGTGGATAATCATGGTTATGCCATATATT
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