CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SALG2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V + L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SALEP (3-deoxy-manno-octulosonate cytidylyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V + L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SALCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Salmonella choleraesuis GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V + L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SALA4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Salmonella agona (strain SL483) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V + L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PROMH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Proteus mirabilis (strain HI4320) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 64/150 (42.67%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP R+AS+R GKPL +I GKPMI R E++K + ++VATD+ + +Q G + MT E +GTER E ++K + D I+VN+QGDEPLI P II V + L + + AV + ++AF+PN VK V+D G+A+Y Sbjct: 5 IIPGRYASTRLPGKPLADIHGKPMIVRVMEQAKRSGA-KRVIVATDNLDVVRAVEQAGGEACMTREDHHSGTERLAEVIEKYQFADDEIIVNVQGDEPLIPPAIITQVAENLANCGAGMATLAVPIVDSKEAFNPNAVKVVMDAKGFALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECOLI (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12) GN=kdsB PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECOLC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECOHS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECODH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ECOBW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.253e-25 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALY 154 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |