CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEMY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas mendocina (strain ymp) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29 Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL +I GKPM+Q WE++K ++ +VVATDD +I E C+ FGA+V++T E +GT+R E +L D IVVN+QGDEPL+ P IID V L P A +T ++ A F+PN VK V D G A+ Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAK-KSSASRVVVATDDARIVEACKVFGAEVLLTREDHNSGTDRLAEVATQLGLPADAIVVNVQGDEPLVPPSIIDQVAANLATNPQAGIATLAEPIEDVTALFNPNVVKVVADKSGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEOMG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29 Identity = 68/154 (44.16%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 ++ IIPAR+AS+RF GK L I+GKPM+Q +ER+ A + ++VATDDE++AE + FG V MTS + GT+R E +++ DI+VN+QGDEPLIEP +ID + L A T + +K D PN VK V D G A+Y Sbjct: 2 KITAIIPARYASTRFPGKALAEIIGKPMVQHVYERTAKAGLVSEVIVATDDERVAEAVRAFGGRVEMTSATHETGTDRLAEVAARIDA--DIIVNVQGDEPLIEPAMIDEAIAPLVADASIRMGTLKSRIKSLHDFLSPNVVKVVTDREGDALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_DESOH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29 Identity = 67/155 (43.23%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIY 585 ++ IIP+R+ S+RF GKPL I G PMIQR +++ K A + + VATDD +I E +FG + +MTS +CR+GT+R EA +++ DIVVNIQGD+PLI P+ ID + L + PD +TA + + ++ +P VK V D G+A+Y Sbjct: 2 KIAAIIPSRYGSTRFAGKPLAPIAGIPMIQRVYDQVKQAICVTDIAVATDDRRIVEAVTRFGGNALMTSAACRSGTDRAAEAAKQMGLAPEDIVVNIQGDQPLIAPQTIDETLAPLLSDPDLGMTTAAFAIMDKQEITNPKDVKMVFDADGFALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain MJ11) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29 Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E ++K D IVVN+QGDEPLI P II V + L + + + AVT + +D F+PN VK V D GYA+Y Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBF1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29 Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E ++K D IVVN+QGDEPLI P II V + L + + + AVT + +D F+PN VK V D GYA+Y Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_THEYD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29 Identity = 67/155 (43.23%), Postives = 100/155 (64.52%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQK-LEKKYD-----IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+RF GKPL + KP+IQ +ER+K + +D + VATDD +I + FG IMTS +GT+R EA+ K L++ Y+ IV+N+QGDEPLI+ E+ID ++ ++ D++ + A K +D F+PN VK V D +GYA+Y Sbjct: 6 VIPARYGSTRFPGKPLAFLKNKPIIQHVYERAKSSKMIDEVFVATDDSRILHTVESFGGKAIMTSSKHPSGTDRIAEAVDKLLQEGYNLQESSIVINLQGDEPLIKKEMIDQLIDLMKNENDSIGTLAKRIEKEDDFFNPNIVKVVFDKNGYALY 160
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEPW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas putida (strain W619) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29 Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAI 582 +IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+V+MT +GT+R E +L D IVVN+QGDEPLI P IID V L A P+A +T + PE F+PN VK V D +G A+ Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGA-GRVVIATDDASIVEACQAFGAEVLMTRADHESGTDRLAEVAAQLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHDPETVFNPNAVKVVSDKNGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEU2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29 Identity = 69/150 (46.00%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A ST + A F+PN VK D +G A+ Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAEVLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGMSTLAEPIDDVAALFNPNIVKVATDINGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEOBB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29 Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 ++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ AT + ++VATDDE+IA + FG V MTS + GT+R E +++ DI+VN+QGDEPLI+P +ID ++ L P +T +K D PN VK V D G +Y Sbjct: 2 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIAAAVRAFGGRVEMTSPTHETGTDRLAEVAARIDA--DIIVNVQGDEPLIDPAMIDEAIRPLLDDPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ALISL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29 Identity = 72/150 (48.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E + K +IVVN+QGDEPLI P II V K L + + + AVT + ED F+PN VK V D GYA+Y Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIDKCGIASNEIVVNVQGDEPLIPPSIIRQVAKNLADSIAPMATLAVTIDEEEDVFNPNAVKVVTDAEGYALY 154 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |