CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FLAJ1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17 Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTA--VTSLKPEDAF-DPNRVKCVVDNHGYAIY 585 +++ +IPAR+AS+RF K + ++ GK +I RT+E + D + V TD + I + G IM+ + +G++R EA+ L+ DIVVN+QGDEP E ++ V+ + PD A + + ED +PN VK VVD +A+Y Sbjct: 2 KIIAVIPARYASTRFPAKLMQDLGGKTVILRTYEAAVSTKLFDDVFVVTDSDLIFDEIVSNGGKAIMSIKEHESGSDRIAEAVANLD--VDIVVNVQGDEPFTEAGPLEQVLSVFKNDPDKKIDLASLMREITNEDEINNPNNVKVVVDQSQFALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB2_BURS3 (3-deoxy-manno-octulosonate cytidylyltransferase 2 OS=Burkholderia sp. (strain 383) GN=kdsB2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17 Identity = 57/152 (37.50%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKY--DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPLV++ G+PMI R R A +VVA DD +IA G MT +GT+R E L ++ + D+V+N+QGDEPL+ ++ AAPD +T + D P VK VVD G A+Y Sbjct: 13 VIPARYGSTRLPGKPLVDLAGEPMIARVHARVSRALPGADIVVAIDDARIAAALDARGIRFAMTGAHHASGTDRAAE-LARVSGWHDTDVVLNVQGDEPLVPEALLKAFADFCVAAPDLGIATVACPVGDAALLDEPGIVKLVVDRRGRALY 163
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLEKKYDI-VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPARF++SR GKPL + G+P+I R ER+ L+T + VATDD +IAE G V MT+ + +G++R E + ++ VVN+QGDEP I V L + + + A T K ED F+PN VK V + HG A+Y Sbjct: 7 IPARFSASRLPGKPLRLLGGRPLIHRVAERA-LSTGAREVWVATDDVRIAEAVASLDGVHVAMTANTHLSGSDRLAECARIAGWDPEVCVVNLQGDEPFAPAAGIRAVAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNTHGEALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XYLF2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain M23) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLEKKYDI-VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPARF++SR GKPL + G+P+I R ER+ L+T + VATDD +IAE G V MT+ + +G++R E + ++ VVN+QGDEP I V L + + + A T K ED F+PN VK V + HG A+Y Sbjct: 12 IPARFSASRLPGKPLRLLGGRPLIHRVAERA-LSTGAREVWVATDDVRIAEAVASLDGVHVAMTANTHLSGSDRLAECARIAGWDPEVCVVNLQGDEPFAPAAGIRAVAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNTHGEALY 160
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHOPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodopseudomonas palustris GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17 Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE--KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +IPAR A++R GKPL++I G PM+ + R++ A + + VATD +IA G +V+MT +G++R EALQ L+ +K + V+N+QGD P I PE I V++ L + + A E+A +PN VK + Sbjct: 9 LIPARMAATRLPGKPLLDIAGLPMVVQVLRRAQ-AAEIGRVAVATDAPEIAAAVTAHGGEVVMTRADHPSGSDRIFEALQTLDPDRKIETVINLQGDFPTIRPEQIGAVLEPLADPAVDIATLAAEIHTEEEATNPNVVKVI 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACIC5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17 Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V+G+IPAR S+R K L I G+PM+ + ++ + L +++ATD E++ E +Q G I T E C +GT+R Q ++ DI VNIQGDEP++ P ++ + P +T ++ +PN VK V G A+Y Sbjct: 6 VLGVIPARIGSTRLPRKVLREIAGEPMLAWVYRAARASGQLRQVLIATDAEEVMEFARQKGLPAIFTPEDCASGTDRVFVVAQSIDA--DIYVNIQGDEPMLTPAHFTALLAPFE-QPHVQVTTLSVPCSEDEIANPNAVKVVTAADGRALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB2_BURCM (3-deoxy-manno-octulosonate cytidylyltransferase 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=kdsB2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17 Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPLV++ G+PMI R R + A +VVA DD +IAE G MT +GT+R E + D V+N+QGDEPL+ ++ AAPD +T + D P VK VVD+ G A+Y Sbjct: 13 VIPARYGSTRLPGKPLVDLDGEPMIVRVHARVRRALPDADIVVAIDDARIAEVLDARGIRFAMTDTGHASGTDRAAEVARVSGWPDTDAVLNVQGDEPLVPTALLQAFAGFCGAAPDLGVATVACPIDEVALLDEPAIVKVVVDHRGRALY 163
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHILW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 V+ +IPAR AS+R GKPL +I G PMI + R++ A + +VVA DD ++ + G +V+MTS ++G++R EALQK++ K + +VN+QGD P I+PE + ++ L+ + + ED P+ VK V Sbjct: 9 VLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAQEAA-IGRVVVAVDDIRVFDAVSAAGFEVVMTSSDHQSGSDRIFEALQKVDPAGKAEFIVNVQGDLPTIDPETVRAALRPLENEAVDIGTLTTEIDNEEDKTAPHIVKVV 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_NITHX (3-deoxy-manno-octulosonate cytidylyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 121 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 ++R + +IPAR A++R GKPL++I G PM+ R++ A + + VATD +IA G + IMT +G++R EAL +L+ + + ++N+QGD P I P+II V+K L + + A E+A +PN VK V Sbjct: 3 KTRTLVLIPARMAATRLPGKPLLDIGGLPMVVHVLRRAETAG-IGRVAVATDTPEIAAAVTAHGGEAIMTRADHPSGSDRVFEALDRLDPDGRIETIINLQGDFPTIRPDIIRDVLKPLADPAVDIATLAAEIHSDEEATNPNVVKAV 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BRUSU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Brucella suis GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 + + +IP R S+R KPL +I GKPMI +R+ A L V+ATD E+I + G + IMT +G++R EAL KL+ + D VVN+QGD P I+P+ I + L+ P + + V E+ +PN VK V Sbjct: 6 KTLTLIPTRLGSTRLPNKPLADICGKPMIVHVADRAA-AAKLGRTVIATDSEEIFKVVAAHGHEAIMTRGDHESGSDRIYEALAKLDPSGEIDAVVNVQGDLPTIDPDTIRRALLPLEDGPADIATLGVEITVEEEKTNPNVVKIV 150 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |