CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BRUC2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 + + +IP R S+R KPL +I GKPMI +R+ A L V+ATD E+I + G + IMT +G++R EAL KL+ + D VVN+QGD P I+P+ I + L+ P + + V E+ +PN VK V Sbjct: 6 KTLTLIPTRLGSTRLPNKPLADICGKPMIVHVADRAA-AAKLGRTVIATDSEEIFKVVAAHGHEAIMTRGDHESGSDRIYEALAKLDPSGEIDAVVNVQGDLPTIDPDTIRRALLPLEDGPADIATLGVEITVEEEKTNPNVVKIV 150
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHOPT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.263e-17 Identity = 53/142 (37.32%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +IPAR A++R GKPL++I G PM+ + R++ A + + VATD +IA G +V+MT +G++R EALQ L ++K + V+N+QGD P I PE I V+ L + + A E+A +PN VK + Sbjct: 9 LIPARMAATRLPGKPLLDIAGLPMVVQVLRRAQ-AAEIGRVAVATDAPEIAAAVTAHGGEVVMTRADHPSGSDRIFEALQTLDPDRKIETVINLQGDFPTIRPEQIGAVLGPLADPAVDIATLAAEIHTEEEATNPNVVKVI 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHIE6 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhizobium etli (strain CIAT 652) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17 Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV-FSTAVTSLKPED 528 V+ +IPAR AS+R GKPL +I G PMI + R+K A + +VVA DD+++ + G DV+MTS ++G++R EAL K++ K +VN+QGD P I+P+ + ++ L+ +AV T T + ED Sbjct: 9 VLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAKEA-AIGRVVVAVDDQQVFDAVSAAGFDVVMTSSDHQSGSDRIFEALTKVDPDGKAKFIVNVQGDLPTIDPQTVRAALRPLE--NEAVDIGTLTTEIDDED 141
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEMAT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17 Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V+ +IPAR ++R KPL + G+P++ R ++R DH VVATD ++ E C + G V+MT +GT+R E A Q +D+++N+QGDEP + E + G V+ + + A TA + + P+ VK V + A+Y Sbjct: 3 VLAVIPARLGATRLPRKPLRLLGGEPIVVRVYQRVVQLGVADHCVVATDHPEVQEACARHGIPVVMTRADHPSGTDRVAEVAAQPEFSSFDVLLNVQGDEPFVSREALAGAVEIVTSGL-APIGTAAVPVSVDTLQRPDVVKVVCADDRRALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANCP (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthomonas campestris pv. campestris GN=kdsB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.496e-17 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +PAR+AS+R GKPL I +PMIQ ER+ LA + VATDD +IAE Q G V MTS +GT+R E + VVN+QGDEP I V + LQ + + + A D FDPN VK V + HG A+Y Sbjct: 4 VPARYASTRLPGKPLQLIGDRPMIQHVAERA-LAAGAREVWVATDDARIAEAIQGLAGVRVAMTSSVHLSGTDRLAECARIAGWDAATCVVNLQGDEPFAPAAGIRAVAQVLQRSGAEMATLAAPVDSAHDLFDPNVVKLVRNAHGDALY 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANCB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=kdsB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.496e-17 Identity = 64/161 (39.75%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 109 SKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 S + S V +PAR+AS+R GKPL I +PMIQ +R+ LA + VATDD +IAE Q G V MTS +GT+R E + VVN+QGDEP I V + LQ + + + A D FDPN VK V + HG A+Y Sbjct: 24 SDDASSAFVVAVPARYASTRLPGKPLQLIGDRPMIQHVADRA-LAAGAREVWVATDDARIAEAIQGLAGVRVAMTSSVHLSGTDRLAECARIAGWDAATCVVNLQGDEPFAPAAGIRAVAQVLQRSGAEMATLAAPVDSAHDLFDPNVVKLVRNAHGDALY 183
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANC8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=kdsB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.496e-17 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +PAR+AS+R GKPL I +PMIQ ER+ LA + VATDD +IAE Q G V MTS +GT+R E + VVN+QGDEP I V + LQ + + + A D FDPN VK V + HG A+Y Sbjct: 4 VPARYASTRLPGKPLQLIGDRPMIQHVAERA-LAAGAREVWVATDDARIAEAIQGLAGVRVAMTSSVHLSGTDRLAECARIAGWDAATCVVNLQGDEPFAPAAGIRAVAQVLQRSGAEMATLAAPVDSAHDLFDPNVVKLVRNAHGDALY 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_METRJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=kdsB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16 Identity = 51/142 (35.92%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +IPAR A++R KPL +I G+ MI W R+ + + +VVATD +IA + G +MT +G++R EAL+ + E ++D+VVN+QGD P I+P II + L + + P +A +PN VK V Sbjct: 7 LIPARLAATRLPNKPLADIAGEAMIVHVWRRA-VEAGIGPVVVATDTAEIARTVEAAGGLAVMTRADHPSGSDRLAEALEIVDPEGRHDVVVNVQGDLPTIDPAIIGAAIVPLADRTVDIVTLCAPITDPHEADNPNVVKLV 147
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa GN=kdsB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 59/150 (39.33%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLEKKYDI-VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPARF++SR GKPL + G+P+I R ER+ L+ + VATDD +IAE G V MT+ + +G++R E + ++ VVN+QGDEP I V L + + + A T K ED F+PN VK V + HG A+Y Sbjct: 12 IPARFSASRLPGKPLRLLGGRPLIHRVAERA-LSAGAREVWVATDDVRIAEAVASLDGVHVAMTANTHLSGSDRLAECARIAGWDPEMCVVNLQGDEPFAPAAGIRAVAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNAHGEALY 160
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PARL1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=kdsB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 47/152 (30.92%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 109 SKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +K + +IPAR AS+R GKPL +I G PMI + W R+ + + +VVA +++IA+ ++ G + ++T +G++R +A+ ++ E + +++N+QGD P ++P +I +AL + + A T E+ +PN VK V Sbjct: 9 AKELAGHPLVVIPARMASTRLPGKPLADICGTPMIVQVWRRA-MEAGVGRVVVAAAEKEIADAVREAGGEAVLTDPDLPSGSDRVWQAVCEVDPEGHHTVILNVQGDLPTLDPALIRTAYEALVRPGADISTLAATITVEEERTNPNVVKAV 159 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |