CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_DICNV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=kdsB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEA-LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+AS+R KPL I G PMI RT ++ +A VA DDE+I + I T + NGT+R +E + + IVVN+QGDEPL+ P++I V + L A +T T ++ PN VK V D GYA+Y Sbjct: 8 VIPARYASTRLPAKPLALIGGVPMIVRTAQQ--VAQAGFPYCVAYDDERIGDVLAAHHIPAIKTRFTHENGTQRLSEVVIARAWTDETIVVNVQGDEPLLPPDLITTVARTLIEHTQASVATLATVCDAPES--PNTVKVVCDCAGYALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_NITWN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=kdsB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +R + +IPAR A++R GKPL++I G PMI R++ A + + VATD IA G + IMT +G++R EAL KL E + D VVN+QGD P I P I V++ L + + A E+A +PN VK V Sbjct: 4 NRTLVLIPARMAATRLPGKPLLDIGGLPMIVHVLRRAE-AAGIGRVAVATDTSDIATAVTAHGGEAIMTRADHPSGSDRVFEALGKLDPEGRIDTVVNLQGDFPTIRPGTIREVLQPLADNAVDIATLAAEIHTEEEAANPNVVKAV 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BRAJA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bradyrhizobium japonicum GN=kdsB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 53/146 (36.30%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 R++ +IPAR A++R GKPL +I G PMI R++ A + + VATD +IA G + +MT + +G++R +EA+QKL E K +IV+N+QGD P I P+ I V+ + + A E+ P+ VK V Sbjct: 5 RILVLIPARMAATRLPGKPLADIAGLPMIVHVLRRAE-AAGIGRVAVATDTPEIAAVVAAHGGEAVMTRTTHPSGSDRIHEAMQKLDPEGKAEIVINLQGDFPTITPQTIREVLPPFADPAVDIVTLASQIHTEEEDLAPSVVKAV 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AZOC5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=kdsB PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 S V+ +IPAR A+SR GKPL ++ G+PMI R+ +A + + VATD +IA+ + G + +MT +G++R EAL L+ +VVN+QGD P I PE I + L+ P + + + + DPN VK V Sbjct: 6 SDVLVLIPARLAASRLPGKPLADVGGRPMIVEVARRA-VAAGIGRVAVATDAVEIADAVRAAGFEAVMTRADHPSGSDRIFEALGVLDPDGAVQVVVNVQGDLPTIAPETIRAALVPLEEGPADIATLTAVITEEGERTDPNVVKVV 151
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AQUAE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aquifex aeolicus GN=kdsB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIY 585 IIPAR S+R + KPL N+LGKP+I+ W L T + +++ATD E++ E + +V +T +G++R ++ L+ D+++N QGDEP + E I + + L+ V + K ++A++ P VK V+D GYA+Y Sbjct: 6 IIPARLGSTRLKEKPLKNLLGKPLIR--WVVEGLVKTGERVILATDSERVKEVVEDL-CEVFLTPSDLPSGSDRVLYVVRDLD--VDLIINYQGDEPFVYEEDIKLIFRELEKGERVV----TLARKDKEAYERPEDVKVVLDREGYALY 146
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain M12) GN=kdsB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.609e-16 Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLEKKYDI-VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPARF++SR GKPL + G+P+I R ER+ L+ + VATDD +IAE G V +T+ + +G++R E + ++ VVN+QGDEP I V L + + + A T K ED F+PN VK V + HG A+Y Sbjct: 12 IPARFSASRLPGKPLRLLGGRPLIHRVAERA-LSAGAREVWVATDDVRIAEAVASLDGVHVAITANTHLSGSDRLAECARIAGWDPEVCVVNLQGDEPFAPAAGIRAVAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNAHGEALY 160
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHOPB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=kdsB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.609e-16 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 ++ + +IPAR A++R GKPL++I G PMI R++ A + + VATD +IA+ G V+MT +G++R EAL KL+ + VVN+QGD P I+P+ I V++ L + + A E++ +PN VK + Sbjct: 4 TKTLVLIPARMAATRLPGKPLMDIAGLPMIVHVLRRAE-AAAIGPVAVATDTAEIADVVTAHGGRVVMTRADHPSGSDRIFEALSKLDPDGAVETVVNLQGDFPTIQPDNIRAVLEPLADPAVDIATLAAQIHTEEESLNPNVVKVI 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICBR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia bellii (strain RML369-C) GN=kdsB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.713e-16 Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R +S+R KPL I +I+R +++ T L+H+ VATD ++IA ++ G VI T + GT+R EA + + +I +VN+QGD P IEPE I V++ L+ + + T V ++ + + V +D+ G AIY Sbjct: 9 IIPSRLSSTRLTRKPLQLIGSSTLIERVFKQVN-QTNLEHIYVATDSQEIASVIEKLGGKVIFTDSNIPTGTDRTYEAFKLIPNNQNINYIVNVQGDMPFIEPESILKVIEDLKNSKYDIV-TPVVKVEKDSVEAASNVTVAIDSKGKAIY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICB8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia bellii (strain OSU 85-389) GN=kdsB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.713e-16 Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R +S+R KPL I +I+R +++ T L+H+ VATD ++IA ++ G VI T + GT+R EA + + +I +VN+QGD P IEPE I V++ L+ + + T V ++ + + V +D+ G AIY Sbjct: 9 IIPSRLSSTRLTRKPLQLIGSSTLIERVFKQVN-QTNLEHIYVATDSQEIASVIEKLGGKVIFTDSNIPTGTDRTYEAFKLIPNNQNINYIVNVQGDMPFIEPESILKVIEDLKNSKYDIV-TPVVKVEKDSVEAASNVTVAIDSKGKAIY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANP2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=kdsB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-AFDPNRVKCV 558 RV+ +IPAR A++R GKPL ++ G+PMI R+ A + + VATD E+IA + G ++T +G++R EAL L+ D+VVN+QGD P I P+ I + L A P +T + ED DPN VK V Sbjct: 9 RVLVLIPARMAATRLPGKPLADVGGRPMIVEVARRA-AAAAIGPVAVATDSEEIAAAVRAAGVTAVLTRADHPSGSDRIFEALGALDPDGAVDVVVNVQGDLPTIAPQTIRSALAPL-AEPAVDIATLCAEIVVEDERTDPNVVKVV 153 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |