CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHIL3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=kdsB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 V+ +IPAR AS+R GKPL +I G PMI + R++ A + +VVA D+ ++ + G +V+MT ++G++R EAL K+ E K I+VNIQGD P I+PE + ++ L+ + + ED P+ VK + Sbjct: 9 VLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAREA-AIGRVVVAVDETRVFDAVAAAGFEVVMTRVDHQSGSDRIFEALTKVDPEGKAKIIVNIQGDLPTIDPETVRAALRPLENEAVDIGTLTTEIDNEEDKTAPHIVKII 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BARHE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bartonella henselae GN=kdsB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +IPAR S+R K L I GKPMI E++K A ++VATD IA+ +G + I+T ++G++R EAL + E++Y++++N+QGD P I P I ++ L+ + + + ++ + DPN VK + Sbjct: 8 LIPARIGSTRLPQKALAEIAGKPMIVHVAEQAKKA-AFGRIIVATDHNNIAKVVTAYGHECIITCRDHKSGSDRIYEALTHIDPERRYNVILNVQGDLPTITPHEIISALRPLENSLTDIATLGAKIVEENEKTDPNIVKII 148
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACIF5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=kdsB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIY 585 +IPAR AS+R K L+++ G PMI++ R+ L + +VVA D ++ +C + +G + ++T+ GTER EA + L D I+VN+QGDEP + P ++ + L P +TA + D DP+ VK V+D G A Y Sbjct: 6 LIPARLASTRLPRKVLLDVGGIPMIEQVRRRA-LESGAAQVVVAADHPEVVDCIRSYGGEALLTAAEHVCGTERLAEAARLLGLADDAIIVNLQGDEPGMTPALLHATAQLLLDHPQRQMATAAVPITHWDELADPHAVKLVLDAEGCARY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACIF2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=kdsB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16 Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIY 585 +IPAR AS+R K L+++ G PMI++ R+ L + +VVA D ++ +C + +G + ++T+ GTER EA + L D I+VN+QGDEP + P ++ + L P +TA + D DP+ VK V+D G A Y Sbjct: 6 LIPARLASTRLPRKVLLDVGGIPMIEQVRRRA-LESGAAQVVVAADHPEVVDCIRSYGGEALLTAAEHVCGTERLAEAARLLGLADDAIIVNLQGDEPGMTPALLHATAQLLLDHPQRQMATAAVPITHWDELADPHAVKLVLDAEGCARY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_OLICO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=kdsB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.050e-15 Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD-PNRVKCV 558 +IPAR A+SR GKPL++I G PMI + R++ A L + VATD +IA G + +MTS +G++R EAL+KL E + V+N+QGD P I P I V++ A P +T ++ D PN VK V Sbjct: 9 LIPARMAASRLPGKPLLDIAGLPMIAQVLRRAREA-RLGRVAVATDSAEIAAAVAAEGGEAVMTSADHPSGSDRIFEALEKLDGEGRIKTVINVQGDLPTIAPADIRAVLQPF-AEPTVDIATLAAQIRVAAEHDNPNVVKVV 149
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_BLOFL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Blochmannia floridanus GN=kdsB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.050e-15 Identity = 60/159 (37.74%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ----QFG--ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPD---AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARF SSRF GK L +I GKPMI R E++ L T ++VATD I + + FG +V +T ++GTER +E +++ D I+V +QGDEPLI +I +V +V + A + D N VK VV+ +G A+Y Sbjct: 6 IIPARFFSSRFPGKLLADIQGKPMIIRVIEKA-LTTKTTKIIVATDSVSIKQIVEYEYYSFGDKVEVCLTYSDHQSGTERISEIVKRYRFADDQIIVQLQGDEPLISSYMIHQIVDVFNMTTSNNISVSTLATPIFFYNEVIDSNIVKVVVNIYGVALY 163
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RHOCS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=kdsB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.371e-15 Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 564 +IPAR A+SR KPL +I G+PMI +R++ A + +VVA D IA+ G ++T + +G++R EA+ +++ ++D VVN+QGD P I+P + V L + + A ++ E+ DPN VK VV+ Sbjct: 11 VIPARLAASRLPDKPLADIHGRPMIAHVLDRAREAD-IGPVVVACADAAIADAVAAAGGRAVLTDPAHPSGSDRVWEAVCRVDPDGRHDAVVNVQGDLPTIDPAAVRAVFGPLARPGTDIATLAAEIVRVEERTDPNVVKAVVE 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_METS4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacterium sp. (strain 4-46) GN=kdsB PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.791e-15 Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 558 +IPAR A++R KPL I G+PMI W R+ + + L +VV TD I + G ++T +G++R EAL + E ++D+VVN+QGD P I+P +I V L + + +PE+ +P+ VK V Sbjct: 7 LIPARLAATRLPDKPLAEICGEPMIVHVWRRA-IESGLGPVVVCTDTPAIVAAVEAVGGLGVLTRPDHPSGSDRLAEALAIIDPEGRHDVVVNVQGDLPTIDPAVIAASVTPLADRAVDIATLCAVITRPEERTEPSVVKVV 147
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANOR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthomonas oryzae pv. oryzae GN=kdsB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.339e-15 Identity = 60/150 (40.00%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPAR+AS R GKPL I +PMIQ ER+ LA + VATDD +IAE G V MT + +GT+R E + + VVN+QGDEP I V LQ + + + A D FDPN VK V + G A+Y Sbjct: 13 IPARYASKRLPGKPLQRIGNRPMIQHVAERALLAGA-RAVWVATDDARIAEAIAHLPGVHVAMTGTAHLSGTDRLAECARIAGWDEQTCVVNLQGDEPFAPAAGIGAVADLLQHSGAEMATLAAPVDSAHDLFDPNVVKLVRNARGDALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_XANOM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=kdsB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.339e-15 Identity = 60/150 (40.00%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPAR+AS R GKPL I +PMIQ ER+ LA + VATDD +IAE G V MT + +GT+R E + + VVN+QGDEP I V LQ + + + A D FDPN VK V + G A+Y Sbjct: 13 IPARYASKRLPGKPLQRIGNRPMIQHVAERALLAGA-RAVWVATDDARIAEAIAHLPGVHVAMTGTAHLSGTDRLAECARIAGWDEQTCVVNLQGDEPFAPAAGIGAVADLLQHSGAEMATLAAPVDSAHDLFDPNVVKLVRNARGDALY 161 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |