CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICAE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia africae (strain ESF-5) GN=kdsB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.827e-14 Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R +S+R + KPL I +I+R + + A L+H VATD E+IA + G VI T + GT+R EA + + +I +VN+QGD P IEP I +++ L+ + + T + + E + V VD+ G A+Y Sbjct: 9 IIPSRLSSTRLKQKPLQLIGSITLIERVFTQVNQAG-LEHTYVATDSEEIASVITKVGGKVIFTDSAIPTGTDRTYEAFKLIPNNQNINYIVNVQGDMPFIEPSSILKIIEYLKNSKYDIV-TPIVKVDRESVKASSNVTVAVDSAGTALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_STRMK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=kdsB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13 Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG-ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPAR+A+SR GKPL + G+P++ R+ L + VATDD++IA+ V MT+ S +GT+R E + D +VVN+QGDEP I V +AL AP + +TAV E FDPN VK V + A+Y Sbjct: 8 IPARYAASRLPGKPLRLLGGEPLVLHVARRA-LQAGAGEVWVATDDQRIADALSGLAEVKVAMTATSHASGTDRLAECARIAGWADDTVVVNLQGDEPFAPAAGIRAVAQALVEGNAPMSTLATAVED--AETLFDPNVVKLVRNVRNEAMY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICAH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia akari (strain Hartford) GN=kdsB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R +S+R + KPL I +I+R +++ A L+H VATD E+I+ ++ VI T + GT+R EA + + +I +VN+QGD P IEP + +++ L+ + + T V + E + V VD+ G A+Y Sbjct: 9 IIPSRLSSTRLKQKPLQLIGSITLIERVFKQINQAN-LEHTYVATDSEEISNIIKKVRGKVIFTDSAIPTGTDRTYEAFKLIPNNQNINYIVNVQGDMPFIEPSSVLKIIEYLKNSEYDIV-TPVVKVDRESVEASSNVTVAVDSAGKALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_STRM5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=kdsB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.319e-13 Identity = 54/150 (36.00%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 142 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG-ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IPAR+A+SR GKPL + G+P++ R+ L + VATDD++IA+ V MT+ S +GT+R E + D +VVN+QGDEP I V +AL + + A T FDPN VK V + A+Y Sbjct: 8 IPARYAASRLPGKPLRLLGGEPLVLHVARRA-LQAGAGEVWVATDDQRIADALSGLAEVKVAMTAASHASGTDRLAECARIAGWADDTVVVNLQGDEPFAPAAGIRAVAEALVGGNAPMSTLATTVEDAHTLFDPNVVKLVRNVRNEAMY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICPR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia prowazekii GN=kdsB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.421e-12 Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R S+R KPL I +I+R +++ A + H VATD E+IA ++ VI T + GT+R EA + + ++I ++N+QGD P IE I +++ L+ + + T V + E D + V VD G A+Y Sbjct: 9 IIPSRLNSTRLIQKPLQLIGSITLIERVFQQVNKAN-IHHTYVATDSEEIANVIKKISGKVIFTDSNIPTGTDRAYEAFKLIPNNHNIHYIINVQGDIPFIEHRSILKIIEYLKNSEYDIV-TPVVKVDRESIEDSSNVTVAVDYTGKALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KPSU1_ECOLX (3-deoxy-manno-octulosonate cytidylyltransferase (Fragment) OS=Escherichia coli GN=kpsU PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.201e-11 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMT 330 S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q FG IMT Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQAFGGKAIMT 70
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_RICTY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia typhi GN=kdsB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.569e-11 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIP+R S+R KPL I +I+R +++ A + H VATD E+IA ++ G VI+T GT+R EA + + +I ++N+QGD P IE I +++ L+ + + T V + E + V VD G A+Y Sbjct: 9 IIPSRLNSTRLIQKPLQLIGSITLIERVFKQVNKAN-IQHTYVATDSEEIANIIKKIGGKVILTDSDIPTGTDRTYEAFKLIPNNNNIHYIINVQGDIPFIEHRSILKIIEYLKNSEYDIV-TPVVRVDRESIEASSNVTVAVDYMGKALY 157 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |