CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACTSZ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=kdsB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29 Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMI+ WE+++ + +VVATD+E++ QFG +V MTSE +GTER E ++KL+ D I+VNIQGDEPLI P I+ V L + S AV ++ F+PN VK + D GY +Y Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIRHVWEKAR-RSGASRVVVATDNEQVKNAVLQFGGEVCMTSEKHNSGTERLAEVVEKLDIADDEIIVNIQGDEPLIPPVIVQQVAANLAKYRVNMASLAVKIEDVQELFNPNAVKVLTDQAGYVLY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEPK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas putida (strain KT2440) GN=kdsB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29 Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAI 582 +IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+V+MT +GT+R E L D IVVN+QGDEPLI P IID V L A P+A +T + +PE F+PN VK V D +G A+ Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGASRVVIATDDTSILEACQAFGAEVMMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PASMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pasteurella multocida GN=kdsB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L + S AV PE+ F+PN VK + D+ GY +Y Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAEVCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMASLAVNITDPEELFNPNAVKVLTDHAGYVLY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBHB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=kdsB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28 Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDD++++ +QFG V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L + + AV E+ F+PN VK V D GYA+Y Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDKRVSAAAEQFGGKVCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMATLAVEIESEEEVFNPNAVKVVADERGYAMY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEOLS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=kdsB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28 Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIY 585 ++V IIPAR+ S+RF GK L ++ GKPMIQ +E++ A+ + +VATDD +IA+ Q G + IMTS GT+R E + L+ DI+VN+QGDEPLI+P +I+ ++ P T + +K D PN VK V DN+GYA+Y Sbjct: 2 QIVAIIPARYGSTRFPGKALADLAGKPMIQHVYEQTIRASLVSRAIVATDDRRIADVIHQIGGEAIMTSTDHETGTDRLAEVARGLDA--DIIVNVQGDEPLIDPAMINQAIEPFLGNPGLKMGTLKSRVKCLHDFLSPNVVKVVTDNNGYALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEE4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas entomophila (strain L48) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.412e-28 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAI 582 +IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E C+ FGA+V++T +GT+R E +L D IVVN+QGDEPLI P IID V L P+A +T + +PE F+PN VK V D HG A+ Sbjct: 8 VIPARLRSTRLPGKPLLPIAGKPMVQHVWEQAR-RSGASRVVIATDDASIVEACRAFGAEVLLTRADHESGTDRLAEVAAQLGLAPDAIVVNVQGDEPLIPPVIIDQVAANLADHPEAGIATLAEPIHEPETIFNPNAVKVVSDKHGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sulfurreducens GN=kdsB PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.412e-28 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIY 585 + IIPARFAS+RF GK L +I GKPM+Q +ER+ A + +VVATDD++IA+ + FG V MTS GT+R E ++ +I+VN+QGDEPLIEP +ID + L P T + ++ D PN VK V D GYA+Y Sbjct: 3 ITAIIPARFASTRFPGKALADIAGKPMVQHVYERTARARLVSEVVVATDDDRIAQAVRGFGGRVEMTSRDHETGTDRLAEVASRIGA--EIIVNVQGDEPLIEPAMIDEAIAPLAENPAVRMGTLKSRIRTLHDFLSPNVVKVVTDLEGYALY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SYNAS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 67/155 (43.23%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 ++V IIP+R++SSRF+GKPL ++ GKPMIQ +ER + + + VATDD +I E ++FG IMT+ R+GT+R EA+ L+ K DIVVN+QGD+P+ EPE I V + L+ P +T + + + E+ PN VK V D + A+Y Sbjct: 3 KIVCIIPSRYSSSRFQGKPLADLCGKPMIQHVYERVLKSELVSYAAVATDDSRIFEAVRKFGGKAIMTAARHRSGTDRIAEAVNSLDLKDDDIVVNVQGDQPIFEPEQIAEVTRPLREDPSLPMATLIYRIVREEEITHPNAVKVVFDRNFNALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB9 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS195) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS185) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKTELDDPMHVKMVFDNNNYALY 157 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |