CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS223) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAEI8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L + S AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVAKNFGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHESR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-7) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28 Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHESM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-4) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28 Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHESA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain ANA-3) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28 Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEON (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella oneidensis GN=kdsB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28 Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain PittEE) GN=kdsB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28 Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L + S AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKNFGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus (strain YJ016) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A A+TS E+ F+PN VK V D GYA+Y Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGKVCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus GN=kdsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A A+TS E+ F+PN VK V D GYA+Y Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGKVCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALY 154 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |