CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEDO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 70/158 (44.30%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD----AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +V +IPARF SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + + FG V+MTS + +GT+R N+A+++L D+V+N+QGD+PLI+P I+ +V + P A +T D DP VK V DN A+Y Sbjct: 2 KVTLLIPARFGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDAIYVATDDDRIKDAVEAFGGKVVMTSAAAASGTDRINDAIEQLGLSDDDLVINLQGDQPLIDPISIEQIVSLFERHPGEFEMATLGFEITDKSELD--DPMHVKMVFDNDFNALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_MARMM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Maricaulis maris (strain MCS10) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 59/132 (44.70%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE 525 V+ +IPAR+ S+RF GKPL I G+ MI+R W + +D +VVATDD++I + G + +MT CRNGTER +A+++L DIV+N+QGD PLI P +I GV + L+A P +T +L PE Sbjct: 3 VLAVIPARYGSTRFPGKPLAMIAGQMMIERVWRIAAAVPGVDRVVVATDDQRIMDAVAAAGGEAVMTDPDCRNGTERALDAVKRLNSDADIVINVQGDAPLIPPWVIGGVAETLRADPSLQMATPAIALPPE 134
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae GN=kdsB PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L + S AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARFASSRLPGKPLADIKGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain PittGG) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L + S AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVVKNFGAEVCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDGEELFNPNAVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CYTH3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.110e-28 Identity = 65/153 (42.48%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 130 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIY 585 +V IIPAR+AS+RF GKPL+ I GK MIQ +++ + + ++VATDD++I +FG V+ T +GT+RC EA QKL K +D ++N+QGDEP I+PE I + L PD +T + ++ E+ F+PN K +V+ +G AIY Sbjct: 7 IVAIIPARYASTRFPGKPLIQINGKTMIQCVYDQVRSTPEITEVLVATDDDRIEAEVLRFGGKVVRTLPEHPSGTDRCFEAYQKLNKPFDFIINVQGDEPFIQPEQIRTLAGIL--TPDVELATLIKKIEDEETLFNPNTPKVLVNANGEAIY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SOLUE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 68/154 (44.16%), Postives = 93/154 (60.39%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIY 585 +++G+IPARF+S+RF GK L I K M+Q +ER+ LAT L ++ATDDE++ + FGA V MT +GT+R E + +I+VNIQGDEPLI+P ID V L PD + T ++ P + DPN VK V D+ G AIY Sbjct: 4 KILGVIPARFSSTRFPGKVLAQIANKTMLQHVYERAGLATYLTSTIIATDDERVYTAAKSFGARVRMTRADHLSGTDRVAEVAS--AENAEIIVNIQGDEPLIDPAAIDAAVLPLVHEPDVLMGTLKKRIEDPREIVDPNVVKVVTDHAGDAIY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SACD2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 +IPARFASSR GKPL +I GKPMIQ +ER+KL+ ++VATD++++ + ++FG +V+MTS +GT+R E Q+L K +I+VN+QGDEPLI P +I+ V +Q A +T L + E FDPN VK V D +G A+Y Sbjct: 6 VIPARFASSRLPGKPLADIAGKPMIQWVYERAKLSDA-SKVIVATDNQQVFDTVKEFGGEVLMTSPKHESGTDRLQEVAQQLGLAKDEIIVNVQGDEPLIPPAVINQVAANIQGNSWASAATLSEPLVESEMVFDPNAVKVVSDVNGAALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEF5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 69/150 (46.00%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL I GKPMIQ WE+++ ++ + +VVATDD++I E CQ FGA+ ++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A +T ++ + F+PN VK V D +G A+ Sbjct: 8 VIPARYASTRLPGKPLQLIAGKPMIQWVWEQAR-KSSAERVVVATDDQRIVEACQGFGAEALLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARMATLAEPIEDVQTLFNPNVVKVVSDLNGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=kdsB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 73/156 (46.79%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIY 585 + V +IPAR SSR E K L ++ G+P+I RTW ++ + D +VVATD+++IA Q +GA+V+MTS R GTER EA + +E DI VN+QGDEPLI PE ID ++ ST V L PED D N VK V+DN GYA+Y Sbjct: 2 KAVILIPARLDSSRLEKKMLADLQGEPLIVRTWRQALKSRLADRVVVATDNDEIASVLQAYGAEVVMTSPHARCGTERIAEAAKSIEG--DIYVNLQGDEPLISPENIDLALEPFFTETPPDCSTLVFPLLPEDFRQLEDINTVKVVMDNAGYALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEAE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa GN=kdsB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLAL 156 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |