CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEAB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=kdsB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=kdsB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=kdsB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +V+ATDDE+I CQ FGA+V++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P++ +T + A F+PN VK D +G A+ Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVIATDDERILAACQGFGAEVLLTRADHNSGTDRLEEVASRLGLAADAIVVNVQGDEPLIPPALIDQVAANLAAHPESAIATLAEPIHDVAALFNPNVVKVATDVNGLAL 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAES2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus somnus (strain 2336) GN=kdsB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 70/150 (46.67%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +V MTS +GTER E ++KL D I+VNIQGDEPLI P I+ V + LQ + + AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQQSGAT-RVVVATDYEEVARAVRGFDGEVCMTSSQHNSGTERLAEVIEKLAVPDDEIIVNIQGDEPLIPPVIVSQVAQNLQKYQVNMATLAVKIEDVEELFNPNVVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB1_ACTP2 (3-deoxy-manno-octulosonate cytidylyltransferase 1 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=kdsB1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.155e-28 Identity = 66/150 (44.00%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+ V + L + + AV E+ F+PN VK + D +G A+Y Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGAT-RVIIATDHPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_HAES1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus somnus (strain 129Pt) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +V MTS +GTER E ++KL D I+VNIQGDEPL+ P I+ V + LQ + + AV E+ F+PN VK + D GY +Y Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQQSGAT-RVVVATDYEEVARAVRGFDGEVCMTSSQHNSGTERLAEVIEKLAIPDDEIIVNIQGDEPLVPPVIVSQVAQNLQKYQVNMATLAVKIEDVEELFNPNVVKVLTDKDGYVLY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHRSD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27 Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 S VV +IPAR+ +SR GKPL+++ G+PMI R W+R+ + +V+ATDDE+I Q +GADV++T+ +GT+R E +LE D IVVN+QGDEPL+ P +ID VV+ L A +T + E F+PN VK V D HG A+Y Sbjct: 2 SDVVVVIPARYGASRLPGKPLLDLHGEPMIARVWQRA-CKSDATRVVIATDDERIEAAMQPYGADVMLTAPDHPSGTDRLAEVAARLELDADTIVVNVQGDEPLLPPALIDQVVRRLADDTTASIATLAEPIGDVETLFNPNVVKVVRDLHGRALY 156
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACTPJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27 Identity = 65/150 (43.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+ V + L + + AV E+ F+PN VK + D +G A+Y Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGAT-RVIIATDHPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ACTP7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27 Identity = 65/150 (43.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+ V + L + + AV E+ F+PN VK + D +G A+Y Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGAT-RVIIATDHPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27 Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQA-APDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL +I GKPMIQ +ER+ LA L + VATDD +I + FG V+MT E+ +GT+R +EA+ L D+V+N+QGD+PLI+P +I+ +V + A + +T +K E DPN VK V DN+ A+Y Sbjct: 6 LIPARYGSSRFPGKPLAHINGKPMIQHVYERASLAKGLKDIYVATDDVRIKNAVESFGGKVVMTGENAASGTDRIDEAISILGLADDDLVINLQGDQPLIDPIVIEQLVSVCERHAGEFDMATLGVEIKDEAQLNDPNHVKVVFDNNHNALY 157 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |