CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_IDILO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Idiomarina loihiensis GN=kdsB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27 Identity = 72/151 (47.68%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSR GKPL +I GKPMIQ ER++ A+ ++VATDD +I E +FG V+MTS +GTER E +++L + ++VVN+QGDEP I PEII V L A +T AV ED F+PN VK V D GYA+Y Sbjct: 6 VIPARYGSSRLPGKPLADIAGKPMIQHVVERAE-ASGAAEVIVATDDMRIKEGVDKFGGRVMMTSSEHSSGTERLAEVIEQLALAENEVVVNVQGDEPFIPPEIIRQVADNLANQRQAPMATLAVPITDAEDIFNPNTVKVVTDAAGYALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AERS4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aeromonas salmonicida (strain A449) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27 Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKI----AECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ A +Q G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L AA + + +V E+AF+PN VK V D GYA+Y Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVHSALASFAEQAGVEVCMTSQDHQSGTERLAEVCRHYGFSADTIVVNVQGDEPLIPPAIIRQVADNLAAASAPMATLSVPIQDAEEAFNPNAVKVVTDKEGYALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_MARAV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27 Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+AS+R GKPL I GKPMIQ ER+ + +VVATDD +I E C+ FGA+VIMTS + +GT+R E +KL+ D VVN+QGDEPLI PE+I+ V L+ +A +T + F+PN VK V D G A Y Sbjct: 6 VIPARYASTRLPGKPLAMIAGKPMIQHVCERAN-ESRASRVVVATDDARIEEACRGFGAEVIMTSPNHASGTDRLEEVARKLQLDPDHRVVNVQGDEPLIPPELINQVADNLEQYQEAAIATLCERIHDARQVFNPNVVKVVFDARGMAHY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_KLEP7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27 Identity = 70/152 (46.05%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ + + AV E+AF+PN VK V+D GYA+Y Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSGMATLAVPIHDAEEAFNPNAVKVVMDAKGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_FUSNN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=kdsB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27 Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIY 585 + +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I FG IMTS++ NGT R E +K+ +YD ++NIQGDEPLIE E+I+ +++ + D +T L E+ +PN VK V D + YAIY Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVINFGGQAIMTSKNHTNGTSRIAEVCEKM-TEYDTIINIQGDEPLIEYEMINSLIETFKENKDLKMATLKHKLLNKEEIKNPNNVKVVCDKNDYAIY 153
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_ANADF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=kdsB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27 Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 RV IIPARF + RF GKPL ++ G+P+I +R++ A +D + VATDD +IA + GA I+T + GT+R EA +KL D+VVN+QGDEPLIEPE I+ +V+A++ + +T L+PE+ VK V D HG A+Y Sbjct: 3 RVAVIIPARFGAQRFPGKPLADLAGQPLIAHVVDRARRARGVDAVAVATDDARIAAAAEAAGAAAILTGPA-STGTDRVAEAARKLMPSPDVVVNLQGDEPLIEPEAIETLVRAMEGGVE--MATLARPLEPEELERTQVVKVVTDRHGDALY 152
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=kdsB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.664e-27 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+Y Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae GN=kdsB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.664e-27 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+Y Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_VIBC3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=kdsB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.664e-27 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+Y Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSESM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas syringae pv. tomato GN=kdsB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.479e-27 Identity = 66/150 (44.00%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAI 582 +IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E C+ FGA+V++T + +GT+R E +L + IVVN+QGDEPLI P +ID V L P+A +T + A F+PN VK D +G A+ Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAEVLLTRDDHNSGTDRLAEVATQLGLAANAIVVNVQGDEPLIPPAVIDQVAANLAKHPEAGMATLAEPIDDVAALFNPNIVKVSTDINGLAL 156 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |