CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_AERHH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=kdsB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.479e-27 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKI----AECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ A C Q G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L AA + + +V E+ F+PN VK V D GYA+Y Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALAACAGQAGFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAAATAPMATLSVPIQDAEEVFNPNAVKVVTDQEGYALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEFN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.544e-27 Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 127 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIY 585 +V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + + FG V+MTS +GT+R N+A+ L D+V+N+QGD+PLI+P I+ ++ + P F A + + DP VK V DN A+Y Sbjct: 2 KVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDSIYVATDDDRIKDAVESFGGKVVMTSPDAASGTDRINDAIALLGLNDDDLVINLQGDQPLIDPISIEQIISLFERHP-GEFEMATLGFEIVDKRELDDPMHVKMVFDNDHNALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_METFK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.544e-27 Identity = 72/151 (47.68%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIY 585 +IPAR+ASSR GKPL++I GKPM+ R ERS LA+ +VVATD E+I E +G DV+MTS +GT+R E +Q+ + D IVVN+QGDEPLI+P +I V L A +A +TA L + +PN VK V+D G+A+Y Sbjct: 6 VIPARYASSRLPGKPLLDIAGKPMVVRVIERS-LASGAAEVVVATDHERIQEAVSSYGYDVMMTSADHASGTDRIAEVVQQRGWEDDTIVVNVQGDEPLIDPRLIGEVAGNLSAHAEASMATACHVLHDTPSILNPNIVKVVLDQQGHALY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB2_ACTP2 (3-deoxy-manno-octulosonate cytidylyltransferase 2 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=kdsB2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.544e-27 Identity = 68/150 (45.33%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+AS+R KPL++ILGKPMIQ WER+K A +++ATD +IAE +FG +V +TS+ +GTER E + K+ D I+VN+QGDEPLI P II V + L + + AV + ++ F+PN VK + D +G A+Y Sbjct: 6 IIPARYASTRLPRKPLLDILGKPMIQHVWERAKQAGG-HRVIIATDHSEIAEVVTRFGGEVCLTSDKHSSGTERLAEVVSKMNISDDEIIVNVQGDEPLIPPCIIKQVAENLDNHQVNMATLAVKLTQRDELFNPNVVKVLSDKNGMALY 154
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEAM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.934e-27 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L+ + VATDDE+I + + FG V+MT +GT+R +A+ +L D+V+N+QGD+PLI+P I+ +V+ + P F A + D DP VK V DN YA+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLNAIYVATDDERIKDAVESFGGKVVMTGADAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIVELFRRHP-GEFEMATLGYQISDKAELDDPKHVKMVFDNDMYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_DESVV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.934e-27 Identity = 65/151 (43.05%), Postives = 95/151 (62.91%), Query Frame = 1 Query: 136 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 GIIPAR+ASSRF GKPL +ILG+PM ++R++ D + +ATDD +IA+ G +MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V +T +L ++A P+RVK VV +G A+Y Sbjct: 9 GIIPARYASSRFPGKPLADILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGVPCVMTAEHHPSGTDRVHEAAMRLGVADDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_SHEWM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27 Identity = 65/152 (42.76%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I E + FG V+MT +GT+R +A+ +L K D++VN+QGD+PLI+P I+ V+ + P ++ + V + + DP VK V DN+ A+Y Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTAIYVATDDDRIKEAVEAFGGKVVMTDPQAASGTDRIEDAITQLGLKDDDLIVNLQGDQPLIDPISIEQVITLFERHPGEFSMATLGVEITEKAELDDPKHVKMVFDNNFNALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_MANSM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPARFASSR GKPL +I GKPMI E+++L+ +VVATD+E++ + +QFG +V MTS +GTER E ++ L D I+VNIQGDEPLI P I+ V + L + S AV + + F+PN VK + D GY +Y Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIIHVLEKARLSGAT-RVVVATDNEEVKQAVEQFGGEVCMTSAKHNSGTERLAEVVETLNIPDDEIIVNIQGDEPLIPPVIVSQVAENLCKFKVNMASLAVKIHESAELFNPNAVKVLTDKDGYVLY 155
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_DESVH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27 Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 136 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 GIIPAR+ASSRF GKPL ILG+PM ++R++ D + +ATDD +IA+ G +MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V +T +L ++A P+RVK VV +G A+Y Sbjct: 9 GIIPARYASSRFPGKPLAEILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGVPCVMTAEHHPSGTDRVHEAAMRLGVPDDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALY 158
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA6 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=kdsB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26 Identity = 68/151 (45.03%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 139 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 IIPAR+AS+RF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG MT +GTER E ++ + +IVVN+QGDEP I E I V + L A +T AV + E+AF+PN VK V+D GYA+Y Sbjct: 6 IIPARYASTRFPGKPLVEINGKPMVQHVYDRA-IESGASNVIVATDDARIAKAVSDFGGKYCMTGAHHESGTERLAEVVEMQDMLSQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEMATLAVKIVDVEEAFNPNAVKVVLDKQGYAMY 155 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |