CX300535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: HUB1_DEBHA (Ubiquitin-like modifier HUB1 OS=Debaryomyces hansenii GN=HUB1 PE=4 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 240 MIEV+ NDRLG K++VKC DTIGDLKK+++ Q GT +KI ++K Y +YKDHITL DYE+H+G ELYYS Sbjct: 1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDYEVHNGFNFELYYS 73
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: HUB1_CANGA (Ubiquitin-like modifier HUB1 OS=Candida glabrata GN=HUB1 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.863e-20 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 240 MIEV++NDRLG K+RVKC EDDT+GD KK+++ Q G + KI +QK ++ KDHITL DYE+HD LELYYS Sbjct: 1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDYEVHDNTNLELYYS 73
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: HUB1_YEAST (Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae GN=HUB1 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 43/72 (59.72%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 237 MIEVV+NDRLG KVRVKC +D++GD KK+++ Q GT+ +KI +QK ++ KDHI+L+DYE+HD LELYY Sbjct: 1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELYY 72
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: HUB1_KLULA (Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis GN=HUB1 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGT-RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 237 MIEV++NDRLG KV VKC +DT+GD KK+++ Q GT A KI +QK ++ KDHITL+DYE+HDG LELYY Sbjct: 1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLEDYEVHDGTNLELYY 73
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: UBL5_DICDI (Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKD--------------YEIHDGMGLELYYS 240 MIEVV NDRLG KVRVK N DDTIGDLKK+++AQ G +A+KIR+QK Y+I+KD + YEIHDG GLELYY+ Sbjct: 1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDRNNNNNYNNYNNNNNNYYYYYEIHDGDGLELYYN 87
BLAST of CX300535 vs. ExPASy Swiss-Prot
Match: HUB1_ASHGO (Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN=HUB1 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 22 MIEVVLNDRLGMKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 237 MIEV++NDRLG K+RVKC D++GDLKK++A Q GT K+ + K KDHI+L DYE+HDG LELYY Sbjct: 1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDYEVHDGTYLELYY 72 The following BLAST results are available for this feature:
BLAST of CX300535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300535 ID=CX300535; Name=CX300535; organism=Citrus clementina; type=EST; length=637bpback to top |