CX300549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.179e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQA+VTGKGPLENLADHLADPVNNNAW+YATNF P K Sbjct: 223 FSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.179e-17 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCP 127 FS FGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNF P Sbjct: 219 FSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVP 260
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENLADHL DPVNNNAWAYATNF P K Sbjct: 221 FSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNF P K Sbjct: 225 FSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.422e-17 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.422e-17 Identity = 40/44 (90.91%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNF P K Sbjct: 220 FSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263 The following BLAST results are available for this feature:
BLAST of CX300549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300549 ID=CX300549; Name=CX300549; organism=Citrus clementina; type=EST; length=263bpback to top |