CX300549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.082e-17 Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 5 STFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 S FGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNF P K Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.249e-17 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFV AIVTGKGPLENLADHLADPVNNNAW+YATNF P K Sbjct: 185 FSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.590e-16 Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL+DH+ADPV NNAWAYATNF P K Sbjct: 194 FSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16 Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNF P K Sbjct: 107 FSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16 Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNF P K Sbjct: 223 FSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16 Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENLADH+ADPV NNAWA+ATNF P K Sbjct: 221 FSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16 Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.023e-15 Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL+DHLADP NNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265 The following BLAST results are available for this feature:
BLAST of CX300549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300549 ID=CX300549; Name=CX300549; organism=Citrus clementina; type=EST; length=263bpback to top |