CX300550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.588e-42 Identity = 83/148 (56.08%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+ IKPDGVQRGLVGE++ R E+KGF L GLK + + AEKHY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I GRN+IHGSD E+A EI LWF + NW S W E Sbjct: 4 ERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDKM_DICDI (Nucleoside diphosphate kinase, mitochondrial OS=Dictyostelium discoideum GN=ndkM PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.588e-42 Identity = 85/141 (60.28%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSS 420 E++FI IK QR L+GE+I R EKKGF L G+K++ A KHYEDL+ KPFF L+++ +SG VVAM++EG+ VV+TGR +IGAT+P+QSAPGTIR DL I TGRNIIHGSDS ESA EIALWF + I NW S+ Sbjct: 73 ERSFIAIKVSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGAVVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETGRNIIHGSDSNESAAHEIALWFKEDEIANWVST 213
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.910e-42 Identity = 79/146 (54.11%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIY 438 E++F+M+KPDGVQRGL+GE+I RLE++G L KLM V R AE+HY L KPFF SLIE+ITSGPV+AM+WEG + R +GATNPA + PGTIR D A N++HGSD ESA++EI LWF + ++ S+ WI+ Sbjct: 2 ERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANAEPGTIRADFACDVSYNVVHGSDGPESAEREIRLWFGEVEPSYSRSVDRWIF 147
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.208e-41 Identity = 82/145 (56.55%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TFI IKPDGVQRG V E+I R EKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDAKW 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAU (Nucleoside diphosphate kinase OS=Staphylococcus aureus GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAT (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAR (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MRSA252) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAN (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain N315) GN=ndk PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAM (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ndk PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAE (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Newman) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149 The following BLAST results are available for this feature:
BLAST of CX300550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300550 ID=CX300550; Name=CX300550; organism=Citrus clementina; type=EST; length=631bpback to top |