CX300550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAC (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain COL) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAB (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAA9 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain JH9) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAA8 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=ndk PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAA3 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain USA300) GN=ndk PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAA2 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain JH1) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAA1 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TFI IKPDGVQRG V E++ R EKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEINLWFNEEELCEWETSDSKW 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 78/147 (53.06%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 438 E+TF+M+KPDGVQR L+GE+++R E+KG L G KLM V A +HY++ + KPFFG L+++ITSGPV AM+WEGE + R +IG TNP ++ PGTIRGD + G+NIIHGSDS ESA +EI L+F D + + ++ WIY Sbjct: 2 EKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.766e-41 Identity = 82/145 (56.55%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TFI IKPDGVQRG V E+I R EKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W +S W Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148 The following BLAST results are available for this feature:
BLAST of CX300550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300550 ID=CX300550; Name=CX300550; organism=Citrus clementina; type=EST; length=631bpback to top |