CX300550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_LISMO (Nucleoside diphosphate kinase OS=Listeria monocytogenes GN=ndk PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.918e-41 Identity = 80/146 (54.79%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 435 EQT++M+KPDGV+RGL+GE++ R+EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESAQ+EI L+F PD +++Q ++ WI Sbjct: 2 EQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI 147
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAW (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MW2) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS++SA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAAS (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MSSA476) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD VQR L+GE+I R+E+KG L G KLM V AE HY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS++SA++EI LWF + I ++ S W+YE Sbjct: 2 ERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 84/148 (56.76%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+ IKPDGVQRG + E+I R EKKGF L GLK + + A+ HY +PFF L+ +I+SGPVVAMIWEGEGV+ + R IIGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W E Sbjct: 4 ERTFLAIKPDGVQRGYIAEIIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TFI IKPDGVQRG V E+I R EKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IG+T P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDLKW 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 441 E+T++MIKPDGVQRGLVGE+I R EK+GF + GLK++ + R AEKHY + KPFF L+ YITS PVVAM+ EG+ V R ++GAT+P ++APGTIRG I GRN+IHGSDS SAQ+EIAL+F D + + L W+YE Sbjct: 2 ERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSPVVAMVIEGKNAVGAAREMMGATDPLKAAPGTIRGTYGIDIGRNVIHGSDSPASAQREIALFFSADELMEYGLELDRWVYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.389e-41 Identity = 83/145 (57.24%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TF+ IKPDGVQRG V ++I R EKKGF L GLK + + A+ HY +PFF L+E+I+SGPVVAMIWEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W Sbjct: 4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEW 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.389e-41 Identity = 82/148 (55.41%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+ IKPDGVQRGLVGE++ R E+KGF L LK + R AE+HY +PFF L+++ITSGPV+AMIWEGEGV+ R +IG+T P + PGTIRGDLAI GRN+IHGSD E+A EI LWF + +W S W E Sbjct: 4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHGSDGPETASFEIGLWFESSELSDWNPSDQLWRVE 151
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.389e-41 Identity = 75/136 (55.15%), Postives = 101/136 (74.26%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN 408 EQTF+M+KPDGV+RGL+GE+I R+E+KGF ++ +K+M V A+ HY + + KPFFG L+ ++TSGPVVA+ EGE VV R +IG T P ++ PGTIRGD A N+IHGSDSVESA++E+ LWF P+N Sbjct: 2 EQTFLMVKPDGVERGLIGEIIARIERKGFVIREMKMMQVTEELAQAHYAEHAEKPFFGELVTFLTSGPVVALRVEGEDVVTVSRMMIGKTKPTEALPGTIRGDFANTMSENVIHGSDSVESAERELGLWFQGQPLN 137
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_LISIN (Nucleoside diphosphate kinase OS=Listeria innocua GN=ndk PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.869e-40 Identity = 78/146 (53.42%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 435 EQT++M+KPDGV+RGL+GE++ ++EKKG L KLM +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+KT R ++G TNP ++ PGTIR + AI T RN+IHGSDS ESA++EI L+F P ++++ ++ WI Sbjct: 2 EQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLMQIDRTLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKTARRMMGKTNPLEADPGTIRAEYAIHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDTWI 147 The following BLAST results are available for this feature:
BLAST of CX300550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300550 ID=CX300550; Name=CX300550; organism=Citrus clementina; type=EST; length=631bpback to top |