CX300550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.251e-44 Identity = 78/146 (53.42%), Postives = 113/146 (77.40%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 435 E+T++M+KPDGVQR L+G ++ R E+KG++L KL+T+ + AE HY + +PFFG L+ +ITSGPV AM+WEGEGV+K R +IGATNP+++APGTIRGDLA+ G N++HGSDS ESA++EIA++F + +N +Q + W+ Sbjct: 2 ERTYVMVKPDGVQRNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGMNVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.753e-44 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 441 E+TF+ IKPDGVQRGLVGE++ R E+KGF L GLK +T R AE+HY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+ GRN+IHGSD+ E+A+ EI LWF +N W S W E Sbjct: 3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAWRVE 150
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.753e-44 Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 441 E++FI IKPDGVQRGLVGE++ R E+KGF L GLK +T R AE+HY +PFFG L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI GRN+IHGSD+ E+A+ EI LWF P +W S W E Sbjct: 4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVE 151
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.753e-44 Identity = 85/148 (57.43%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 441 E+TFI IKPDGVQRGLVGE++ R E+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD+ E+A+ EI LWF +N W S W E Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTWRVE 150
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.207e-44 Identity = 80/146 (54.79%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 435 E+TF+M+KPDGVQR L+GE++ R EKKG+ L G KLMTV R AE+HY + +PFFG L+++ITSGPV AM+W+G V+ T R ++G TNP +A GTIRGD A G NIIHGSDS ESA++EI LWF + ++++ ++ WI Sbjct: 2 EKTFLMVKPDGVQRNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.059e-43 Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 432 E+TFI IKPDGVQRGL+GE++ R E+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI GRN+IHGSD+ E+AQ EI LWF + +W S W Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGW 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_STAHJ (Nucleoside diphosphate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ndk PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.059e-43 Identity = 83/148 (56.08%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 441 E+TF+MIKPD +QR LVGE+I R+E+KG L G KLMTV + AE+HY + + KPF+G LI +ITS PV AM+ EGE V R IIG TNP+++ PG+IRGDL + GRN+IHGSDSVESAQ+EI LWF + + ++++ W+YE Sbjct: 2 ERTFLMIKPDAIQRNLVGEIISRIERKGLKLVGAKLMTVPQALAEEHYSEHTDKPFYGKLISFITSAPVFAMVVEGEDAVDVSRHIIGKTNPSEATPGSIRGDLGLTVGRNVIHGSDSVESAQREINLWFKEEELSSYEAPRDTWLYE 149
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_BACC1 (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 10987) GN=ndk PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.059e-43 Identity = 79/147 (53.74%), Postives = 110/147 (74.83%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIY 438 E+TF+M+KPDGVQR +GE++ R EKKGF L G KLM V A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD + +NIIHGSDS+ESA++EIA++F + +++ ++ WIY Sbjct: 2 EKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIAIFFKEEELVDYSKLMNEWIY 148
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.059e-43 Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 441 E+TF+ +KPDGV RGLVGE+I R EKKGF L GLK + + AE HY + +PFFG L+ +ITSGPVVAM++EG+GVV + R +IG TNP SAPG+IRGD + GRNIIHGSDSVESA +EIALWF + + +P +YE Sbjct: 9 ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155
BLAST of CX300550 vs. ExPASy Swiss-Prot
Match: NDK_BACCR (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ndk PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.383e-43 Identity = 79/147 (53.74%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 1 EQTFIMIKPDGVQRGLVGELIIRLEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIY 438 E+TF+M+KPDGVQR +GE++ R EKKGF L G KLM V A +HY + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD + +NIIHGSDS+ESA++EIA++F + +++ ++ WIY Sbjct: 2 EKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHKEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIAIFFKEEELVDYSKLMNEWIY 148 The following BLAST results are available for this feature:
BLAST of CX300550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300550 ID=CX300550; Name=CX300550; organism=Citrus clementina; type=EST; length=631bpback to top |