CX300593

Overview
NameCX300593
Unique NameCX300593
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig19 contig Ccv1_Contig19:87..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PHOLL (Cyanate hydratase OS=Photorhabdus luminescens subsp. laumondii GN=cynS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 3
Query:   18 SFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQ-EPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            +F  IA+ TGL+  +V   L  Q  L P  A ++     EL ++    +   P+R   P  I  +PT+YR  E V  +G ++K +++E+FGDGI+SAIDF                 IT DGKYLP
Sbjct:   28 TFEDIAQGTGLSLAFVTAALLGQHPL-PADAARVVVDRLELEEDAFFLLQTIPVRGSIPGGIPTDPTIYRFYEMVQVYGSTLKALVHEQFGDGIISAIDFKLDIKKVDDPNGGSRAVITLDGKYLP 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_ANASP (Cyanate hydratase OS=Anabaena sp. (strain PCC 7120) GN=cynS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            ++ G SF  +    G   V +A L  RQA    E A  L  AL  L    I  +   P++   P +  +P +YR  E +  +G  IKE+I E+FGDGIMSAIDF                 IT  GK+LPY +
Sbjct:   15 KDKGLSFADLEATLGRDEVCIAALFYRQASASEEEAKLLVEALG-LDSSYIKHLTEYPVKGLGPVVPTDPLIYRFYEIMQVYGFPIKEVIQEKFGDGIMSAIDFTLD-VEKEADPKGDRVKITMSGKFLPYKK 145          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_SERP5 (Cyanate hydratase OS=Serratia proteamaculans (strain 568) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   18 SFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQ-EPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            +F  I + TGL+  +V   L  Q  L PE A ++ A   +L ++ I  +   P+R   P  +  +PT+YR  E V  +G ++K +++E+FGDGI+SAI+F                 IT DGKYLP
Sbjct:   28 TFEAINQGTGLSLAFVTAALLGQHPL-PEQAARVVAEKLDLDEDAIRLLQTIPLRGSIPGGVPTDPTIYRFYEMVQIYGSTLKALVHEQFGDGIISAINFKLDIKKVPDPDGGERAVITLDGKYLP 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PROMT (Cyanate hydratase OS=Prochlorococcus marinus (strain NATL2A) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIR-SYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +E G +F  I    GL  V+VA L   Q+    E A KL   L  L  EL   +  PP++ S DP +  +P +YR  E +  +G  +K++I E+FGDGIMSAIDF  +              +   GK+LPY +
Sbjct:   15 KEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLG-LGAELKEILTTPPVKGSLDPVIPTDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTIN-VDKVEDPKGDRVKVAMCGKFLPYKK 146          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_BURCJ (Cyanate hydratase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   18 SFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIR-SYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            SF Q+ + TGL+  +V   L  Q  L P  A ++ A    L D+ +  +   P+R S D  +  +PT+YR  E +  +G ++K +++E+FGDGI+SAI+F                 IT DGKYLP
Sbjct:   28 SFAQLTDGTGLSEAFVTAALLGQHAL-PADAARIVADKLGLDDDAVLLLQTIPLRGSIDDRVPTDPTIYRFYEMLQVYGTTLKALVHEKFGDGIISAINFRLDVKKVDDPEGGSRAVITLDGKYLP 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PSEA7 (Cyanate hydratase OS=Pseudomonas aeruginosa (strain PA7) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 3
Query:   12 GKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQ-EPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            G S+  +A+ TGL   +V   L  Q  L PE A +  A    L D+ +  +   P+R   P  I  +PT+YR  E +  +G ++K +++E+FGDGI+SAI+F                 IT DGKYLP
Sbjct:   26 GLSWQDLADGTGLALTFVTAALLGQHAL-PEAAARKVAGQLGLDDDAVLLLQTIPLRGSIPGGIPTDPTIYRFYEMLQVYGSTLKALVHEQFGDGIISAINFKLDIQKVEDPEGGSRAVITLDGKYLP 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_BURS3 (Cyanate hydratase OS=Burkholderia sp. (strain 383) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 3
Query:   18 SFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIR-SYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            SF Q+ E TGL+  +V   L  Q  L  + A  +   L  L D+ +  +   P+R S D  +  +PT+YR  E +  +G ++K +++E+FGDGI+SAI+F                 IT DGKYLP
Sbjct:   28 SFAQLTEGTGLSEAFVTAALLGQHALPVDAARNVADKLG-LDDDAVLLLQSIPLRGSIDDRVPTDPTIYRFYEMLQVYGTTLKALVHEKFGDGIISAINFRLDVKKVDDPEGGSRAVITLDGKYLP 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_SYNS3 (Cyanate hydratase OS=Synechococcus sp. (strain CC9311) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 46/133 (34.59%), Postives = 62/133 (46.62%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +  G SF  +    GL  V++A L   QA   PE A KL   L   P         P   S DP +  +P +YR  E +  +G  +K++I E+FGDGIMSAIDF                 +T  GK+LPY +
Sbjct:   18 KAKGLSFADLEVALGLDEVWIASLFYGQATASPEEAEKLATLLGLDPAITAALQEFPTKGSLDPVIPTDPLIYRFYEIMQVYGMPLKDVIQEKFGDGIMSAIDFTLD-VDKVEDPKGDRVKVTMCGKFLPYKK 149          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_SYNP6 (Cyanate hydratase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cynS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRS-YDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +  G +F ++ +  G   V++A +  RQ+   PE A KL  AL  L   L  E+  PP++   +P +  +P +YR  E +  +G  +K++I E+FGDGIMSAIDF                 +T  GK+L Y +
Sbjct:   14 KAKGITFTELEQLLGRDEVWIASVFYRQSTASPEEAEKLLTALG-LDLALADELTTPPVKGCLEPVIPTDPLIYRFYEIMQVYGLPLKDVIQEKFGDGIMSAIDFTLD-VDKVEDPKGDRVKVTMCGKFLAYKK 145          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_SYNE7 (Cyanate hydratase OS=Synechococcus elongatus (strain PCC 7942) GN=cynS PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRS-YDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +  G +F ++ +  G   V++A +  RQ+   PE A KL  AL  L   L  E+  PP++   +P +  +P +YR  E +  +G  +K++I E+FGDGIMSAIDF                 +T  GK+L Y +
Sbjct:   14 KAKGITFTELEQLLGRDEVWIASVFYRQSTASPEEAEKLLTALG-LDLALADELTTPPVKGCLEPVIPTDPLIYRFYEIMQVYGLPLKDVIQEKFGDGIMSAIDFTLD-VDKVEDPKGDRVKVTMCGKFLAYKK 145          
The following BLAST results are available for this feature:
BLAST of CX300593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
CYNS_PHOLL1.526e-1235.71Cyanate hydratase OS=Photorhabdus luminescens subs... [more]
CYNS_ANASP1.526e-1235.34Cyanate hydratase OS=Anabaena sp. (strain PCC 7120... [more]
CYNS_SERP51.994e-1234.92Cyanate hydratase OS=Serratia proteamaculans (stra... [more]
CYNS_PROMT1.994e-1235.82Cyanate hydratase OS=Prochlorococcus marinus (stra... [more]
CYNS_BURCJ1.994e-1234.92Cyanate hydratase OS=Burkholderia cepacia (strain ... [more]
CYNS_PSEA72.604e-1235.16Cyanate hydratase OS=Pseudomonas aeruginosa (strai... [more]
CYNS_BURS32.604e-1234.92Cyanate hydratase OS=Burkholderia sp. (strain 383)... [more]
CYNS_SYNS33.401e-1234.59Cyanate hydratase OS=Synechococcus sp. (strain CC9... [more]
CYNS_SYNP63.401e-1232.84Cyanate hydratase OS=Synechococcus sp. (strain ATC... [more]
CYNS_SYNE73.401e-1232.84Cyanate hydratase OS=Synechococcus elongatus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC07012A09SK SaltLeaf1 Citrus clementina cDNA clone C07012A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300593 ID=CX300593; Name=CX300593; organism=Citrus clementina; type=EST; length=699bp
GGCGAGAATCCGGTAAGTCATTTAATCAGATTGCAGAAGAGACAGGGCTG
ACAAACGTCTACGTTGCGCAGCTACTCAAACGCCAAGCGCAGCTCAAGCC
CGAAACTGCCCCCAAGCTACGGGCAGCCCTGCCCGAGCTGCCCGATGAGC
TTATTCACGAGATGATGAGACCGCCAATAAGATCGTATGACCCGAACTTG
ATCCAGGAACCCACCGTTTATAGGTTAAACGAAGCGGTTATGCATTTTGG
TGAGAGTATTAAGGAAATTATCAATGAGGAGTTTGGTGATGGCATCATGT
CGGCTATAGACTTCTACTGCTCTGTTGACAAAGTTAAAGGTGTGGATGGG
AAAGATCGTGTGGTCATTACTTTTGATGGAAAATATTTACCTTATAGTGA
GCAGAAGTCGGAGCACATGGTTTCAAGACTACAACAGCAGTGAAGTTAAT
CCATTTCCTACCTGGTGCAGATTCTATACACGCATAATACTTATTGTACG
AGTGAACTCCCTGGAGCTACCATAGTTGGATGCTTCATGGCCTGTGCTTT
GTAATGTAAAGATAATTGTTTGTGCAAGTGCGCGCGCAGGGTCTTGTGTG
ATATTCCCAGCATTAAATGCCATATTCGGGAAGAGCTACTATTGCCATCC
GCATATGGCCTATCTGTGTTATTGTTTTTGACCATTTTCACATCTGAAT
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