CX300596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GL+AG+FTK D A T++ AL+AGTVW NCY V A +PFGG+K+SG GRE G Y L Sbjct: 419 TTYGLSAGIFTKDLDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGL 478
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 + +GLAAG++T++ A+ + L+AGTVW NCY+VFDAA PFGGYK SG+GRE G Y+L+ Sbjct: 421 SEYGLAAGLWTENVKQAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYALD 481
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14 Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GLAA VFTK D A T AL+AGTVW NCY F A PFGG+K+SG GRE G Y L Sbjct: 432 TTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGL 491
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL+AGVFTK D A T++ AL+AGTVW NCY V A PFGG+K+SG GRE G Y + Sbjct: 424 TFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFH 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GLAAGVFTK D A T++ AL+AG VW NCY + A PFGG+K+SG GRE G + L Sbjct: 424 TTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGL 483
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GLAAGVFTK D A T++ AL+AGTVW NCY PFGG+K+SG GRE G Y L+ Sbjct: 163 TFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLH 223
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLNALL 195 T +GLAA VFTK+ DTA + +L AGTVW N Y+ F PFGGYK+SG GRE G Y L A L Sbjct: 421 TSYGLAAAVFTKNIDTALKVANSLEAGTVWVNTYNHFAFQAPFGGYKMSGQGREFGHYGLEAFL 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL+AGVFT D A T++ AL+AGTVW NCY V A PFGG+K+SG GRE G Y + Sbjct: 424 TFYGLSAGVFTNDIDKAVTISSALQAGTVWVNCYGVVTAQCPFGGFKMSGNGRELGEYGFH 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL AG FTK D A T++ AL+AGTVW NCY V A PFGG+K+SG GRE G Y + Sbjct: 423 TTYGLFAGSFTKDLDKAITVSAALQAGTVWVNCYGVVSAQCPFGGFKMSGNGREMGEYGFH 483
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL+AG+FT D A T++ AL++GTVW NCY V A PFGG+K+SG GRE G Y + Sbjct: 424 TFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFH 484 The following BLAST results are available for this feature:
BLAST of CX300596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300596 ID=CX300596; Name=CX300596; organism=Citrus clementina; type=EST; length=492bpback to top |