CX300596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL+AG+FT D A T++ AL++GTVW NCY V A PFGG+K+SG GRE G Y + Sbjct: 424 TFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFH 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GLAAG+ TK TA ++ ALRAGTVW N Y++ +PFGG+K SGIGRE G Y+L Sbjct: 420 TSYGLAAGIHTKDVTTAIRVSNALRAGTVWVNSYNLIQYQVPFGGFKESGIGRELGSYAL 479
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GL A VFTK+ D A + AL +GTVW NCY+ F A PFGG+K+SG GRE G Y+L Sbjct: 435 TDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYAL 494
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GLAAG+FTK D A T++ AL+AG VW NCY + A PFGG+K+SG GRE G + L Sbjct: 424 TTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGL 483
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13 Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKG 171 T +GLAAGVFTK D A T++ AL+AGTVW NCY PFGG+K+SG GRE G Sbjct: 424 TPYGLAAGVFTKDLDRAITVSSALQAGTVWVNCYLTLSVQCPFGGFKMSGNGREMG 479
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GL A VFTK+ D A + AL +GTVW NCY+ F A PFGG+K+SG GRE G Y+L Sbjct: 435 TDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFYAQAPFGGFKMSGNGRELGEYAL 494
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12 Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 10 FGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 +GLAAGV T + A ++ AL AGTVW NCY++ IPFGGYK SGIGRE G Y L Sbjct: 427 YGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGL 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL AGVFTK D A T++ AL+AGTVW NCY A P GG+K+SG GRE G Y ++ Sbjct: 424 TYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIH 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GL AGVFTK D A T++ AL+AGTVW NCY A P GG+K+SG GRE G Y ++ Sbjct: 424 TYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIH 484
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T +GLAAGVFTK D A T++ AL+AG VW NCY PFGG+K+SG GRE G + L Sbjct: 424 TTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGL 483 The following BLAST results are available for this feature:
BLAST of CX300596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300596 ID=CX300596; Name=CX300596; organism=Citrus clementina; type=EST; length=492bpback to top |