CX300596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 10 FGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 FGL A VFT + A ++ A++AGTVW NCY+ +A PFGG+K+SG GRE G + L Sbjct: 443 FGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGL 500
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 10 FGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 FGL A VFT + A ++ A++AGTVW NCY+ +A PFGG+K+SG GRE G + L Sbjct: 443 FGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGL 500
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T FGLAAGVFT + + ++AGT W N Y++ +PFGGYK SGIGRE GI +L Sbjct: 408 TEFGLAAGVFTADIARGHRVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAAL 467
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLNA 189 TR+GLAA VFT+ D A ++AL+AGTVW N Y++ PFGG+K SG GRE G L A Sbjct: 442 TRYGLAAAVFTRDLDKALYFSQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKA 503
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 T FGLAAGVFT+ A+ + L+AGT W N Y++ IPFGG+K SGIGRE + +L Sbjct: 408 TEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAAL 467
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSL 183 + FGLAAGVFT + + ++AGT W N Y++ +PFGGYK SGIGRE GI +L Sbjct: 408 SEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTSVEVPFGGYKQSGIGRENGIAAL 467
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 10 FGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKG 171 +GLAA V TK+ +TA ++ AL+AGTVW N Y+ +PFGGYK SGIGRE G Sbjct: 420 YGLAAAVHTKNLNTAIEVSNALKAGTVWVNTYNTLHHQMPFGGYKESGIGRELG 473
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGREKGIYSLN 186 T +GLAA V T + TA + ALRAGTVW N Y+ +PFGGYK SGIGRE G +L+ Sbjct: 419 TTYGLAAAVHTSNLTTAIEVANALRAGTVWVNSYNTLHWQLPFGGYKESGIGRELGEAALD 479
BLAST of CX300596 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 4 TRFGLAAGVFTKSADTANTMTRALRAGTVWTNCYDVFDAAIPFGGYKLSGIGRE 165 T++GL AGV++++ + A M R ++AG VWTNCY + A FGGYK SGIGRE Sbjct: 432 TQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRE 485 The following BLAST results are available for this feature:
BLAST of CX300596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300596 ID=CX300596; Name=CX300596; organism=Citrus clementina; type=EST; length=492bpback to top |