CX300598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_CAIMO (Histone H2B OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 4.012e-36 Identity = 73/89 (82.02%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IY++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVR +LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 SYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRSLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B7_CHICK (Histone H2B 7 OS=Gallus gallus GN=H2B-VII PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 4.012e-36 Identity = 73/89 (82.02%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IY++KVLKQVHPD GISSKAM IMNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 SYSIYVYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B12_XENLA (Histone H2B 1.2 OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 4.012e-36 Identity = 72/89 (80.90%), Postives = 84/89 (94.38%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IY++KV+KQVHPD GISSKAMGIMNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 37 SYAIYVYKVMKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_SIPNU (Histone H2B OS=Sipunculus nudus GN=H2B PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 5.240e-36 Identity = 73/89 (82.02%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IYI+KVLKQVHPD GISSKAM IMNSF+NDIFE++A E+SRLA YN++ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 34 SYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNRRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1N_BOVIN (Histone H2B type 1-N OS=Bos taurus GN=HIST1H2BN PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 6.844e-36 Identity = 72/89 (80.90%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y +Y++KVLKQVHPD GISSKAMG MNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 SYSVYVYKVLKQVHPDTGISSKAMGNMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1K_MACFA (Histone H2B type 1-K OS=Macaca fascicularis GN=HIST1H2BK PE=2 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 6.844e-36 Identity = 71/89 (79.78%), Postives = 84/89 (94.38%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y +Y++KVLK+VHPD GISSKAMGIMNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 37 SYSVYVYKVLKRVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_ASTPE (Histone H2B OS=Asterina pectinifera PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 8.938e-36 Identity = 72/89 (80.90%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IYI+KV+KQVHPD GISSKAM IMNSF+NDIFE++A E+SRLA YNKK TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 SYGIYIYKVMKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKKSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 121
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2BFS_HUMAN (Histone H2B type F-S OS=Homo sapiens GN=H2BFS PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 8.938e-36 Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y +Y++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A E+SRL YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 37 SYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLPHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1A_MOUSE (Histone H2B type 1-A OS=Mus musculus GN=Hist1h2ba PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 8.938e-36 Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IYI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 38 SYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_RHASC (Histone H2B OS=Rhacophorus schlegelii GN=histh2b PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 1.167e-35 Identity = 72/89 (80.90%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 15 AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 +Y IY++KVLKQVHPD GISSKAM IMNSF+NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 37 SYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125 The following BLAST results are available for this feature:
BLAST of CX300598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300598 ID=CX300598; Name=CX300598; organism=Citrus clementina; type=EST; length=426bpback to top |