CX300598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI_010709 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.205e-40 Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 65 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN 152
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B8_ORYSJ (Histone H2B.8 OS=Oryza sativa subsp. japonica GN=H2B.8 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.574e-40 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 66 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B8_ORYSI (Histone H2B.8 OS=Oryza sativa subsp. indica GN=H2B.8 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.574e-40 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 66 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B6_ORYSI (Histone H2B.6 OS=Oryza sativa subsp. indica GN=H2B.6 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.574e-40 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 66 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B5_WHEAT (Histone H2B.5 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.574e-40 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 49 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 136
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B5_ARATH (Histone H2B.5 OS=Arabidopsis thaliana GN=At3g09480 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.574e-40 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 3 Query: 9 T*AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 T YKIY+FKVLKQVHPDIGIS KAMGIMNSFIND FEK+A ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 36 TETYKIYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 126
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B2_WHEAT (Histone H2B.2 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.056e-40 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 3 Query: 6 GT*AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 G YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 59 GVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B6_ORYSJ (Histone H2B.6 OS=Oryza sativa subsp. japonica GN=H2B.6 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.685e-40 Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 66 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1_MAIZE (Histone H2B.1 OS=Zea mays PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 2.685e-40 Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 64 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B3_MAIZE (Histone H2B.3 OS=Zea mays PE=3 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 3.507e-40 Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPT+TSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 66 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTVTSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153 The following BLAST results are available for this feature:
BLAST of CX300598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300598 ID=CX300598; Name=CX300598; organism=Citrus clementina; type=EST; length=426bpback to top |