CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.968e-23 Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+C+A+I+IR E A+IE G +D N LK APHP +L + W P SRE AA PA WLR KFWPA R+DN YGDR+L+CT Sbjct: 863 LDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHLVCT 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.968e-23 Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+ALI+IR+E A IE GK DI +N LK APH L+ W P SRE AA PA W R KFWP+ GR+D +GDRN +C+ LP Sbjct: 891 LDRFCEALIAIRQEIADIEAGKVDIQDNSLKNAPHTVESLIVGEWPHPYSREQAAYPAPWTREHKFWPSVGRIDAAFGDRNFVCSCLP 978
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BDEBA (Glycine dehydrogenase [decarboxylating] OS=Bdellovibrio bacteriovorus GN=gcvP PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.700e-22 Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ +++++IR+E A +E GK D NN LK APH +LM W P SRE A P WLR KFWP GRVDN YGDRNLIC+ Sbjct: 865 LDRFIESMVTIRKEIAAVETGKMDKENNALKNAPHTAQMLMKPEWNHPYSREEAVYPVEWLRGNKFWPVVGRVDNAYGDRNLICS 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.207e-21 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A++ I +E ++NG D +N LK +PH +++ D W RE AA PASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 872 LDRFCEAMLLIYQEILDVQNGTLDKTDNPLKNSPHTAAMVTSDRWDHLYPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR CDALI IREE +IE GKAD NNVL +PH +++ D W P SR AA P +KFWP GR+DNV+GD+NL+C+ P Sbjct: 902 LDRLCDALILIREEIREIETGKADRKNNVLVNSPHTEKVIVADNWNYPYSRSKAAFPTPATVASKFWPTVGRIDNVHGDKNLVCSCPP 989
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BORPD (Glycine dehydrogenase [decarboxylating] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvP PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 L+R+ DA+I+IREE AQ+E G+ D +NVLK APH +L+ + W R+ AA P + LR AK+WP RVDN YGDRNL+C LP Sbjct: 865 LERFIDAMIAIREEIAQVERGERDRDDNVLKNAPHTAQMLLAEEWLHDYPRQQAAYPVASLRDAKYWPPVARVDNAYGDRNLVCACLP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A++ I +E +++G D +N LK +PH +++ D W RE AA PASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 872 LDRFCEAMLLIYQEILDVQSGTLDKTDNPLKNSPHTAAMVTSDRWDHLYPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_FLAJ1 (Glycine dehydrogenase [decarboxylating] OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=gcvP PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.591e-20 Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDALISIR+E IE AD NNVLK APH ++L D+W P SRE AA P ++ KFWP+ RVD+ YGDRNL+C+ P Sbjct: 858 LDRFCDALISIRKE---IEAATADDKNNVLKNAPHTLAMLTSDSWDFPYSREKAAYPLEYIADNKFWPSVRRVDDAYGDRNLVCSCAP 942
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20 Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 L+R+CDA+I+IREE A IE+G+ D NN L+ APH + + + W +P SR AA P + R +KFWPA R+DN YGDRNL+C+ Sbjct: 860 LNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPYSRAEAAFPLAEQRQSKFWPAVSRIDNAYGDRNLLCS 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PROM3 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvP PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20 Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 L+R+CDA+I+IREE A IE+G+ D NN L+ APH + + + W +P SR AA P + R +KFWPA R+DN YGDRNL+C+ Sbjct: 880 LNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPYSRAEAAFPLAEQRQSKFWPAVSRIDNAYGDRNLLCS 964 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |