CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB8 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS185) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ + NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL C +P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPVDNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB5 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ + NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPVDNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB2 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS223) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ + NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPVDNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFVAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURPS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURP6 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 668) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURP1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1710b) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURP0 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1106a) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 878 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 965
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURMS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain SAVP1) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURMA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |