CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURM9 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain NCTC 10229) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURM7 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain NCTC 10247) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XYLFT (Glycine dehydrogenase [decarboxylating] OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.067e-16 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IR E A IE G D +N LK APH +M W SRE AA P L AK+WP RVDNVYGD++++C +P Sbjct: 883 LDRFVDAMIQIRGEIAAIEKGHLDPEDNPLKQAPHTAVQVMASQWGHAYSRELAAFPLGVLHHAKYWPPVARVDNVYGDKHVMCACIP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XYLFA (Glycine dehydrogenase [decarboxylating] OS=Xylella fastidiosa GN=gcvP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.067e-16 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IR E A IE G D +N LK APH +M W SRE AA P L AK+WP RVDNVYGD++++C +P Sbjct: 883 LDRFVDAMIQIRGEIAAIEKGHLDPEDNPLKQAPHTAVQVMASQWGHAYSRELAAFPLGVLHHAKYWPPVARVDNVYGDKHVMCACIP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PROMA (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus GN=gcvP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.067e-16 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 ++R+C+A+ISIR E IE+G D+ NN L+ APH + + W +P +R+ AA P KFWPA R+DN +GDRNL+C+ Sbjct: 870 INRFCEAMISIRSEIDAIESGITDLSNNPLRLAPHTMETVTAEIWDRPYTRQQAAFPLKDQFMNKFWPAVSRIDNAFGDRNLVCS 954
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_AZOSE (Glycine dehydrogenase [decarboxylating] OS=Azoarcus sp. (strain EbN1) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.067e-16 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLM---GDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR E ++ENG +N LK APH + + G W++P SRE A P W+ KFWP+ R+D+VYGDRNL C +P Sbjct: 876 LDRFIAAMITIRNEIREVENGAWPTDDNPLKNAPHTQADFIAADGAQWSRPYSREQAVFPLPWVAENKFWPSVNRIDDVYGDRNLFCACVP 966
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_TERTT (Glycine dehydrogenase [decarboxylating] OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-16 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I IREE +IE G+ +N L APH + W + +R+ A P +L+ K WP R+DNVYGDRNLIC+ Sbjct: 869 LDRFCDAMIQIREEIRKIEQGELPADDNPLVNAPHTLDDVCNSEWNRSYTRDQACRPLDYLKHHKVWPTVNRIDNVYGDRNLICS 953
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-16 Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LD++ DALI+IR E A++E G + +N L APH + L G W + SR A P+S KFWP T R+DNVYGDRNLIC+ P Sbjct: 860 LDKFIDALITIRHEIAKVEEGTWTLADNPLVNAPHTLNDLTGSDWPRAYSRLTACYPSSCPSQPKFWPTTNRIDNVYGDRNLICSCPP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRASO (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain ORS278) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.821e-16 Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IR+E A++E G+ I + L+ APH + D W++ R PA R K+W GRVDNVYGDRNL+C+ P Sbjct: 861 LDRFCDAMIAIRKEIAEVEQGRFTIEASPLRHAPHTVHDIADDEWSRAYRRSEGCFPAGSSRTDKYWCPVGRVDNVYGDRNLVCSCPP 948
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHESW (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain W3-18-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.378e-16 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPADNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAP 957 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |