CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPC (Glycine dehydrogenase [decarboxylating] OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.378e-16 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPADNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.378e-16 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A++SIR E AQ++ G +N LKGAPH + + G W + S E A P + R K+WPA RVDNVYGDRNL C +P Sbjct: 863 LDRFIEAMLSIRAEIAQVQEGNWPAEDNPLKGAPHTLADITG-VWERSYSIEQAVLPTAHTRAHKYWPAVNRVDNVYGDRNLFCACVP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCLE (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium leprae GN=gcvP PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.106e-16 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I+IR E A++ G+ + +N L+GAPH L+ W P +RE AA P K WP R+D VYGDRNL+C+ LP Sbjct: 860 IDAFCEAMIAIRGEIARVGAGEWSVEDNPLRGAPHTAECLLASDWDHPYTREEAAYPLGKAFRPKVWPPVRRIDGVYGDRNLVCSCLP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCLB (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium leprae (strain Br4923) GN=gcvP PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.106e-16 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I+IR E A++ G+ + +N L+GAPH L+ W P +RE AA P K WP R+D VYGDRNL+C+ LP Sbjct: 860 IDAFCEAMIAIRGEIARVGAGEWSVEDNPLRGAPHTAECLLASDWDHPYTREEAAYPLGKAFRPKVWPPVRRIDGVYGDRNLVCSCLP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEPK (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas putida (strain KT2440) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.056e-16 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+++IR E +++ G NN LK APH + ++G W +P S E A P++ +R K+WPA RVDNVYGDRNL C +P Sbjct: 866 LDRFVEAMLAIRAEIDEVQQGNWPAENNPLKHAPHTLADVLG-VWDRPYSLEQAVAPSAHVRQHKYWPAVNRVDNVYGDRNLFCACVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_DEIRA (Glycine dehydrogenase [decarboxylating] OS=Deinococcus radiodurans GN=gcvP PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E +++G ++ LK APH LM WT+ SRE A P++ + K+WPA RVDNVYGDRN +C+ P Sbjct: 855 LDRFVDAMLNIRREIQDVQDGTISAADSPLKHAPHTLKDLMDSEWTRAYSRETGAFPSAAQKAWKYWPAVNRVDNVYGDRNFVCSCPP 942
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHESM (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain MR-4) GN=gcvP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.037e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E G+ NN L APH + +M + ++P SRE A P++ +R KFWP R+D+VYGDRNL C +P Sbjct: 869 LDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAPHTMADIMDSAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEON (Glycine dehydrogenase [decarboxylating] OS=Shewanella oneidensis GN=gcvP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.037e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E G+ NN L APH + +M + ++P SRE A P++ +R KFWP R+D+VYGDRNL C +P Sbjct: 869 LDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAPHTMADIMDSAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRAJA (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium japonicum GN=gcvP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.037e-16 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IR+E ++E G+ I + L+ APH + D W + SR P R K+W GRVDNVYGDRNL+C+ P Sbjct: 859 LDRFCDAMIAIRKEIGEVEAGRFKIEASPLRHAPHTVHDIADDAWARAYSRAEGCFPDGVSRTDKYWSPVGRVDNVYGDRNLVCSCPP 946
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHESR (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain MR-7) GN=gcvP PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.180e-15 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E G+ NN L APH + +M + ++P SRE A P++ +R KFWP R+D+VYGDRNL C +P Sbjct: 869 LDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAPHTMADIMDPAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVP 957 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |