CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEFN (Glycine dehydrogenase [decarboxylating] OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvP PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15 Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+ISIR E ++E G+ + NN L APH + +M + ++P SRE A P + ++ KFWP R+D+VYGDRNL+C+ +P Sbjct: 869 LDRFIEAMISIRGEITKVEAGEWPVDNNPLHNAPHTLADIMDPEFDSRPYSREVAVFPTAAVKANKFWPTVNRIDDVYGDRNLMCSCVP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHELP (Glycine dehydrogenase [decarboxylating] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+++IR E A++E G+ NN L APH + +M + ++P SRE A P + ++ KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIEAMVAIRGEIAKVEAGEWPADNNPLHNAPHTMADIMDSEFDSRPYSRETAVFPTAAVKANKFWPTVNRIDDVYGDRNLMCSCAP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCTU (Probable glycine dehydrogenase [decarboxylating] OS=Mycobacterium tuberculosis GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I IR E ++ G+ + +N L+GAPH L+ W P +RE AA P K WPA R+D YGDRNL+C+ P Sbjct: 849 VDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCTA (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I IR E ++ G+ + +N L+GAPH L+ W P +RE AA P K WPA R+D YGDRNL+C+ P Sbjct: 849 VDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBT (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I IR E ++ G+ + +N L+GAPH L+ W P +RE AA P K WPA R+D YGDRNL+C+ P Sbjct: 849 VDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBP (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I IR E ++ G+ + +N L+GAPH L+ W P +RE AA P K WPA R+D YGDRNL+C+ P Sbjct: 849 VDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBO (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis GN=gcvP PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +C+A+I IR E ++ G+ + +N L+GAPH L+ W P +RE AA P K WPA R+D YGDRNL+C+ P Sbjct: 849 VDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSYCK (Glycine dehydrogenase [decarboxylating] OS=Psychrobacter cryohalolentis (strain K5) GN=gcvP PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.704e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKAD--IHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ AL SI+ E + + G+ + + NN L APH ++++ WT P SRE AA P ++R KFWP+ RVD+ YGD+NL+C+ Sbjct: 871 LDRFISALKSIKAEALKAKAGEDNWTLENNPLVNAPHTAAMVIDGEWTYPYSRETAAFPLPYIRTNKFWPSVARVDDAYGDKNLMCS 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSYA2 (Glycine dehydrogenase [decarboxylating] OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gcvP PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.704e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKAD--IHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ AL SI+ E + + G+ + + NN L APH ++++ WT P SRE AA P ++R KFWP+ RVD+ YGD+NL+C+ Sbjct: 871 LDRFISALKSIKAEAMKAKAGEDNWTLENNPLVNAPHTAAMVIDGEWTYPYSRETAAFPLPYIRTNKFWPSVARVDDAYGDKNLMCS 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHESH (Glycine dehydrogenase [decarboxylating] OS=Shewanella sediminis (strain HAW-EB3) GN=gcvP PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.226e-14 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+ISIR E +++E+G+ NN L APH + +M + ++P SRE A P + ++ KFWP R+D+V+GDRNL C +P Sbjct: 869 LDRFIEAMISIRGEASRVESGEWPADNNPLHNAPHTLADIMDPEFDSRPYSREVAVFPTAAVKLNKFWPTVNRIDDVFGDRNLFCACVP 957 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |