CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEAE (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas aeruginosa GN=gcvP2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.226e-14 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A++SIR E ++E+G +N LK APH + + G W +P A P+ R K+WPA RVDNVYGDRNL C +P Sbjct: 866 LDRFVEAMLSIRAEIGKVESGAWPAEDNPLKRAPHTLADVTG-IWQRPYEIAEAVTPSEHARAFKYWPAVNRVDNVYGDRNLFCACVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_YERE8 (Glycine dehydrogenase [decarboxylating] OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvP PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.907e-14 Identity = 37/88 (42.05%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E ++ G+ + +N L APH + L+G+ W P SRE A P + + K+WP+ R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIEKVARGEWPLEDNPLVNAPHTQAELVGE-WQHPYSRELAVFPVAGVMENKYWPSVKRLDDVYGDRNLFCSCVP 954
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_YEAST (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Saccharomyces cerevisiae GN=GCV2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.797e-14 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHP-PSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+ISI+EE + G+ +LK APH L+ W T+ +RE AA P +LR+ KFWP R+D+ YGD NLICT Sbjct: 938 LDRFCDAMISIKEEINALVAGQPK--GQILKNAPHSLEDLITSSNWDTRGYTREEAAYPLPFLRYNKFWPTVARLDDTYGDMNLICT 1022
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_GLUOX (Glycine dehydrogenase [decarboxylating] OS=Gluconobacter oxydans GN=gcvP PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.797e-14 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IR E A++E G+ + ++ L+ APH + L GD W + SRE P + AK+W GR+DN +GDRNL+C+ Sbjct: 859 LDRFCDAMIAIRAEIAEVEAGRVGMEDSPLRFAPHTTADLAGD-WERSYSREAGCFPGG-VDTAKYWSPVGRLDNAWGDRNLVCS 941
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCPA (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium paratuberculosis GN=gcvP PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +CDA+I+IR E ++ G+ + +N L+GAPH L+ W P SRE AA P K WP R+D YGDRNL+C+ P Sbjct: 849 VDAFCDAMIAIRGEIDRVGAGEWPVEDNPLRGAPHTAECLVTTDWDHPYSREQAAYPLGKDFRPKVWPPVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MYCA1 (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium avium (strain 104) GN=gcvP PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +D +CDA+I+IR E ++ G+ + +N L+GAPH L+ W P SRE AA P K WP R+D YGDRNL+C+ P Sbjct: 849 VDAFCDAMIAIRGEIDRVGAGEWPVEDNPLRGAPHTAECLVTTDWDHPYSREQAAYPLGKDFRPKVWPPVRRIDGAYGDRNLVCSCPP 936
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHILO (Glycine dehydrogenase [decarboxylating] OS=Rhizobium loti GN=gcvP PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.476e-14 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWL-RFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+I+I E A++ G + +N L APH + + WT P SR AA PA AK+WP R+DNV GDRNL+C+ P Sbjct: 840 LDRFCEAMIAIAGEAAKVARGDWPLADNPLVNAPHTAAETLAGQWTHPYSRLEAAYPAGDADTAAKYWPPVSRIDNVAGDRNLVCSCPP 928
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NEIMF (Glycine dehydrogenase [decarboxylating] OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gcvP PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ AL I++E ++ G+ +N L APH S + G+ W P SRE A P ++R KFWP+ RVD+VYGDRNL+C+ P Sbjct: 858 LDRFIAALKQIKQEVLKVGRGEWPKEDNPLVNAPHTASDVTGE-WAHPYSREEAVFPLPFVREHKFWPSVNRVDDVYGDRNLVCSCPP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NEIM0 (Glycine dehydrogenase [decarboxylating] OS=Neisseria meningitidis serogroup C (strain 053442) GN=gcvP PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ AL I++E ++ G+ +N L APH S + G+ W P SRE A P ++R KFWP+ RVD+VYGDRNL+C+ P Sbjct: 858 LDRFIAALKQIKQEVLKVGRGEWPKEDNPLVNAPHTASDVTGE-WAHPYSREEAVFPLPFVREHKFWPSVNRVDDVYGDRNLVCSCPP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BARHE (Glycine dehydrogenase [decarboxylating] OS=Bartonella henselae GN=gcvP PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFA-KFWPATGRVDNVYGDRNLICTLLP 265 +DR+CDAL+SI EE +I +G +N L APH + DTW +P SR+ AA P L A K+WP R+DNV GDR LIC+ P Sbjct: 838 IDRFCDALLSIAEEAKKIGSGVWPKDDNPLVHAPHTLVDTLDDTWARPYSRQEAAFPNCSLDPANKYWPPVSRIDNVAGDRMLICSCPP 926 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |