CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_STRCO (Glycine dehydrogenase [decarboxylating] OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+I+IR E ++ +G +N L+GAPH L G+ W +RE A PA K+WP R+D YGDRNL+C+ P Sbjct: 869 LDRFCEAMIAIRAEIEKVGSGAWPADDNPLRGAPHTADALGGE-WDHAYTREEAVFPAGVSAADKYWPPVRRIDQAYGDRNLVCSCPP 955
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NEIG2 (Glycine dehydrogenase [decarboxylating] OS=Neisseria gonorrhoeae (strain NCCP11945) GN=gcvP PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ AL SIR E ++ +G+ +N L APH + + G+ W P SRE A P ++R KFWP RVD+VYGDRNL+C+ P Sbjct: 858 LDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGE-WAHPYSREEAVFPLPFVREHKFWPFVNRVDDVYGDRNLVCSCPP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NEIG1 (Glycine dehydrogenase [decarboxylating] OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gcvP PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ AL SIR E ++ +G+ +N L APH + + G+ W P SRE A P ++R KFWP RVD+VYGDRNL+C+ P Sbjct: 858 LDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGE-WAHPYSREEAVFPLPFVREHKFWPFVNRVDDVYGDRNLVCSCPP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_STRGG (Glycine dehydrogenase [decarboxylating] OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.443e-13 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CD +I+IR E ++ +G+ +N L APH + L GD W SRE A PA K+WP R+D +GDRNL+C+ P Sbjct: 869 LDRFCDTMIAIRAEIEKVASGEWSADDNPLSNAPHTAAALGGD-WEHGYSREEAVFPAGVSAADKYWPPVRRIDGAFGDRNLVCSCPP 955
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SERP5 (Glycine dehydrogenase [decarboxylating] OS=Serratia proteamaculans (strain 568) GN=gcvP PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.884e-13 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E ++ G+ + +N L APH + L+ D W SRE A P + +R K+WP+ R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRSEIDRVAKGEWPLEDNPLVNAPHIQAELVSD-WQHAYSRELAVFPIAGVRENKYWPSVKRLDDVYGDRNLFCSCVP 954
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_STRAW (Glycine dehydrogenase [decarboxylating] OS=Streptomyces avermitilis GN=gcvP PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.461e-13 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+I+IR E ++ +G+ +N L+ APH + L G+ W SRE A PA K+WP R+D +GDRNL+C+ P Sbjct: 869 LDRFCEAMIAIRAEVEKVGSGEWPAEDNPLRNAPHTAAALGGE-WEHAYSREEAVFPAGVSAADKYWPPVRRIDQAFGDRNLVCSCPP 955
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSEHT (Glycine dehydrogenase [decarboxylating] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.461e-13 Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+ +A++SI+ E ++ +G+ I NN L APH ++G+ W + R AA P + KFWP R+D+VYGDRNL+C P Sbjct: 870 IDRFIEAMVSIKSEIDKVISGEWSIENNPLVFAPHTQGDVLGNEWDRAYDRFYAAFPVPSVAKNKFWPTVTRIDDVYGDRNLVCACPP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOSK (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gcvP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+ AL++IREE +E G+ ++ L+ APH L+ D W + RE P R K+WP GRVDN +GDRNL+CT P Sbjct: 861 IDRFVAALLAIREEIRAVEEGEIAAADSPLRHAPHTVEDLVAD-WDRKYPREQGCFPPGSFRVDKYWPPVGRVDNAWGDRNLVCTCPP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS4 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gcvP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+ AL++IREE +E G+ ++ L+ APH L+ D W + RE P R K+WP GRVDN +GDRNL+CT P Sbjct: 861 IDRFVAALLAIREEIRAVEEGEIAAADSPLRHAPHTVEDLVAD-WDRKYPREQGCFPPGSFRVDKYWPPVGRVDNAWGDRNLVCTCPP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS1 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gcvP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+ AL++IREE +E G+ ++ L+ APH L+ D W + RE P R K+WP GRVDN +GDRNL+CT P Sbjct: 861 IDRFVAALLAIREEIRAVEEGEIAAGDSPLRHAPHTVEDLVAD-WDRKYPREQGCFPPGSFRVDKYWPPVGRVDNAWGDRNLVCTCPP 947 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |