CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHIME (Glycine dehydrogenase [decarboxylating] OS=Rhizobium meliloti GN=gcvP PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 48/88 (54.55%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+++IREE IE+G+ D NN LK APH L+GD W +P SRE A P R K+W RVDNVYGDRNL+CT P Sbjct: 859 LDRFCDAMLAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVGD-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_AGRT5 (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvP PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+CDA+++IREE IE G+AD +NN LK APH L+G+ W +P SRE P R K+W R+DNVYGDRNLICT P Sbjct: 859 IDRFCDAMLAIREEARDIEEGRADKNNNPLKNAPHTVEDLVGE-WDRPYSREKGCFPPGAFRIDKYWSPVNRIDNVYGDRNLICTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.630e-20 Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I IREE +ENG D +N LK APH + L+G+ WT P SRE A P + L K+WP GRVDNV+GDRNL+C Sbjct: 859 LDRFCDAMIRIREEIRAVENGTLDKDDNPLKNAPHTAAELVGE-WTHPYSREQAVYPVASLIEGKYWPPVGRVDNVFGDRNLVC 941
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBFM (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain MJ11) GN=gcvP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.048e-20 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IREE ++E G+ + NN L APH LM D+W P +RE A P+S + +K+WP RVDNVYGDRNLIC+ Sbjct: 862 LDRFCDAMIAIREEMHKVEQGEWPLDNNPLVNAPHTQVDLMSDSWDHPYTREVACFPSSQSKDSKYWPTVNRVDNVYGDRNLICS 946
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBF1 (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gcvP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.048e-20 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IREE ++E G+ + NN L APH LM D+W P +RE A P+S + +K+WP RVDNVYGDRNLIC+ Sbjct: 862 LDRFCDAMIAIREEMNKVEQGEWPLDNNPLVNAPHTQVDLMSDSWEHPYTREVACFPSSQSKDSKYWPTVNRVDNVYGDRNLICS 946
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.048e-20 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 L+R+ DA+I+IR E AQ+E G+ D +NVLK APH +L+ + W R+ AA P + LR K+WP RVDN YGDRNL+C+ LP Sbjct: 863 LERFIDAMIAIRAEVAQVERGERDREDNVLKNAPHTAQMLLAEEWHHAYPRQQAAYPLASLRDGKYWPPVARVDNAYGDRNLVCSCLP 950
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSEFS (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas fluorescens (strain SBW25) GN=gcvP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.898e-20 Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I+IREE +ENG D +N LK APH + L+G+ W+ P SRE A P + L K+WP GRVDNV+GDRNL+C Sbjct: 855 LDRFCDAMIAIREEIRAVENGTLDKDDNPLKNAPHTAAELVGE-WSHPYSREQAVYPVASLIEGKYWPPVGRVDNVFGDRNLVC 937
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBL (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.898e-20 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A++ I +E ++NG D +N LK +PH ++ D W +E AA PA W R KFWP GRVDNVYGDRNL+C+ LP Sbjct: 872 LDRFCEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAMTTSDRWDHLYPKERAAYPAPWSRDHKFWPFVGRVDNVYGDRNLVCSCLP 959
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBJ (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.898e-20 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A++ I +E ++NG D +N LK +PH ++ D W +E AA PA W R KFWP GRVDNVYGDRNL+C+ LP Sbjct: 872 LDRFCEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAMTTSDRWDHLYPKERAAYPAPWSRDHKFWPFVGRVDNVYGDRNLVCSCLP 959
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RALME (Glycine dehydrogenase [decarboxylating] OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.032e-19 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR E A++E+G D +N LK APH ++++ D W +RE AA P + LR K+WP GR DNVYGDRNL C+ +P Sbjct: 880 LDRFIDAMIAIRGEIARVEDGSFDREDNPLKHAPHTAAVVVSDKWNHKYTREEAAYPVASLRTQKYWPPVGRADNVYGDRNLFCSCVP 967 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |