CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECODH (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain K12 / DH10B) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECOBW (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain K12 / BW2952) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO81 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O81 (strain ED1a) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO5E (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO57 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 GN=gcvP PE=3 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO45 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO27 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUSU (Glycine dehydrogenase [decarboxylating] OS=Brucella suis GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUSI (Glycine dehydrogenase [decarboxylating] OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUME (Glycine dehydrogenase [decarboxylating] OS=Brucella melitensis GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |