CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUMB (Glycine dehydrogenase [decarboxylating] OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUC2 (Glycine dehydrogenase [decarboxylating] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUAB (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus GN=gcvP PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUA2 (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus (strain 2308) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUA1 (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus (strain S19) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*P-ASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +RE A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP1_COLP3 (Glycine dehydrogenase [decarboxylating] 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A++ IR+E ++E+G+ NN L APH + + + W +P S + A P + KFWP R+D+V+GDRNLIC+ P Sbjct: 873 LDRFIEAMVCIRDEVRKVESGEWASDNNPLHNAPHTLADIT-EPWDRPYSIQEAVFPVVAVTANKFWPTVNRIDDVFGDRNLICSCPP 959
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NOCFA (Glycine dehydrogenase [decarboxylating] OS=Nocardia farcinica GN=gcvP PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRF-AKFWPATGRVDNVYGDRNLICTLLP 265 LD + A+I+IR E Q+ G +N L+GAPH L+G+ WT P SRE A P AK WPA R+D YGDRNL+C+ P Sbjct: 841 LDEFVAAMIAIRAEIDQVGAGVWPAEDNPLRGAPHTAECLVGE-WTHPYSREIAVYPRGLGHARAKVWPAVRRIDGAYGDRNLVCSCPP 928
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_KLEP3 (Glycine dehydrogenase [decarboxylating] OS=Klebsiella pneumoniae (strain 342) GN=gcvP PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E +++ G+ + +N L APH L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDRVKAGEWPLEDNPLVNAPHTQGELVSE-WNHPYSRELAVFPAGLHN--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS5 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+ AL++IREE +E G+ ++ L+ APH L+ D W + RE P R K+WP GRVDN +GDRNL+C P Sbjct: 861 IDRFITALLAIREEIRAVEAGEIAAADSPLRHAPHTVEDLVAD-WDRNYPREQGCFPPGAFRVDKYWPPVGRVDNAWGDRNLVCICPP 947
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ESCF3 (Glycine dehydrogenase [decarboxylating] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |