CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_EDWI9 (Glycine dehydrogenase [decarboxylating] OS=Edwardsiella ictaluri (strain 93-146) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+++I +E ++E G+ + +N L APH L+G+ W P RE A P R K+WPA R+D+VYGDR+L C+ P Sbjct: 869 LDRFIAAMLAIHDEITRVETGEWPLQDNPLVNAPHTQRELVGE-WHHPYGRELAVFPTPQTRENKYWPAVKRLDDVYGDRHLQCSCPP 955
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECOSE (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain SE11) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECOHS (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O9:H4 (strain HS) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO8A (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O8 (strain IAI1) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO55 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain 55989 / EAEC) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ECO24 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH + L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BACTN (Glycine dehydrogenase [decarboxylating] OS=Bacteroides thetaiotaomicron GN=gcvP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LD + D +++I +E +++N +AD ++NVL APHP ++ D W +RE AA P +R KFW RVDN GDR L+ T Sbjct: 859 LDNFVDVMLNIWKEIQEVKNEEADKNDNVLINAPHPEYEIVNDNWEHSYTREKAAYPIESVRENKFWVNVARVDNTLGDRKLLPT 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BARQU (Glycine dehydrogenase [decarboxylating] OS=Bartonella quintana GN=gcvP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12 Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWL-RFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+CDAL+SI EE ++ G +N L APH + D W P SR+ AA P L K+WP R+DNV GDR LIC+ P Sbjct: 838 IDRFCDALLSIAEEAKKVGAGVWPKDDNPLVNAPHTLVDTLDDAWVHPYSRQEAAFPNHHLDPTNKYWPPVSRIDNVAGDRVLICSCPP 926
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SODGM (Glycine dehydrogenase [decarboxylating] OS=Sodalis glossinidius (strain morsitans) GN=gcvP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q+ +G +N L AP+ L G+ W P R+ AA PA + K+WPA R+D+VYGDRNL C +P Sbjct: 865 LDRFIDAMLAIRAEIQQVADGVWPASDNPLVNAPYTQRELAGE-WRHPYDRQIAAFPAGY--GDKYWPAVKRLDDVYGDRNLFCACVP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHIBS (Glycine dehydrogenase [decarboxylating] OS=Shigella boydii serotype 4 (strain Sb227) GN=gcvP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G + +N L APH S L+ + W P S E A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAE-WAHPYSHEVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |