CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SALNS (Glycine dehydrogenase [decarboxylating] OS=Salmonella newport (strain SL254) GN=gcvP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ G +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAGVWPQEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHISS (Glycine dehydrogenase [decarboxylating] OS=Shigella sonnei (strain Ss046) GN=gcvP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+++IR E Q++ + +N L APH S L+ + W P SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIDAMLAIRAEIDQVKAAVWPLEDNPLVNAPHIQSELVAE-WAHPYSREVAVFPAGVAD--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BRUO2 (Glycine dehydrogenase [decarboxylating] OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gcvP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PA-SWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR CDA+I+I E ++ +G +N L APH S + W P +R A P ++ AK+WP RVDNV GDRNLIC+ P Sbjct: 839 IDRLCDAMIAIAGEAKKVADGVWPADDNPLANAPHTASDTLATEWKHPYTRAEAIFPGGAFDPTAKYWPPVSRVDNVGGDRNLICSCPP 927
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ENT38 (Glycine dehydrogenase [decarboxylating] OS=Enterobacter sp. (strain 638) GN=gcvP PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+++IR E +++ G+ + +N L APH + L+ + W +RE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFIEAMLAIRHEITRVKQGEWTLEDNPLVNAPHTQNELVAE-WHHGYTREVAVFPAGMAN--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BACFR (Glycine dehydrogenase [decarboxylating] OS=Bacteroides fragilis GN=gcvP PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LD + +++I E +++NG+AD +NVL APHP ++ D W +RE AA P +R KFW RVDN GDR L+ T Sbjct: 859 LDNFVLTMLTIWNEIQEVKNGEADKEDNVLINAPHPEYEVVSDQWEHCYTREKAAYPIESVRENKFWVNVARVDNTLGDRKLLPT 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BACFN (Glycine dehydrogenase [decarboxylating] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvP PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LD + +++I E +++NG+AD +NVL APHP ++ D W +RE AA P +R KFW RVDN GDR L+ T Sbjct: 859 LDNFVLTMLTIWNEIQEVKNGEADKEDNVLINAPHPEYEVVSDQWEHCYTREKAAYPIESVRENKFWVNVARVDNTLGDRKLLPT 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SALAR (Glycine dehydrogenase [decarboxylating] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvP PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+++IR E +++ G+ + +N L APH + L + W SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFINAMLAIRAEIERVKAGEWPLEDNPLVNAPHTQNELAAE-WNHSYSREVAVFPAGVAN--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_CITK8 (Glycine dehydrogenase [decarboxylating] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvP PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+++IR E +++ G+ + +N L APH + L+ + W SRE A PA K+WP R+D+VYGDRNL C+ +P Sbjct: 868 LDRFINAMLAIRAEIDRVKAGEWPLEDNPLVNAPHTQNELVAE-WNHGYSREVAVFPAGVAN--KYWPTVKRLDDVYGDRNLFCSCVP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_JANSC (Glycine dehydrogenase [decarboxylating] OS=Jannaschia sp. (strain CCS1) GN=gcvP PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+ +IR E A++E+G ++ L APH L+ D W + +RE P R K+WP RVDNV GDRNLICT P Sbjct: 849 LDRFITAMQAIRAEIAEVEDG-LPAGDSPLHHAPHTMEDLVRD-WDRAYTREQGCFPPGAFRVDKYWPPVNRVDNVAGDRNLICTCPP 934 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |