CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SINMW (Glycine dehydrogenase [decarboxylating] OS=Sinorhizobium medicae (strain WSM419) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.347e-19 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDAL++IREE I G+ D NN LK APH L+GD W +P SRE A P R K+W RVDNVYGDRNL+CT P Sbjct: 859 LDRFCDALLAIREEARAIAEGRMDKINNPLKNAPHTVEDLVGD-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RALEJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia eutropha (strain JMP134) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.347e-19 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR+E ++E+G D +N LK APH +++ + WT+ +RE AA P + LR K+WP GR DNVYGDRNL C+ +P Sbjct: 882 LDRFIDAMIAIRKEIGRVEDGSFDRDDNPLKHAPHTAAVVTANEWTRKYTREEAAYPVASLRTQKYWPPVGRADNVYGDRNLFCSCVP 969
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_DINSH (Glycine dehydrogenase [decarboxylating] OS=Dinoroseobacter shibae (strain DFL 12) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.347e-19 Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+++IREE I G D NN LK APH L+GD W +P SRE A P R K+WP RVDN YGDRNL+CT P Sbjct: 859 LDRFCDAMLAIREEADAIAAGSLDAENNPLKRAPHTVEDLVGD-WDRPYSREQACYPPGAFRVDKYWPPVNRVDNAYGDRNLVCTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEF5 (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.347e-19 Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I IREE +ENG D +N LK APH + L+G+ W+ P SRE A P + L K+WP GRVDNV+GDRNL+C Sbjct: 858 LDRFCDAMIRIREEIRAVENGALDKDDNPLKNAPHTAAELVGE-WSHPYSREQAVYPVASLVEGKYWPPVGRVDNVFGDRNLVC 940
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEAE (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas aeruginosa GN=gcvP1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.347e-19 Identity = 48/88 (54.55%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I IREE +E G+ D +N LK APH + L+G+ W SRE AA P + L AK+WP GRVDNVYGDRNL C+ P Sbjct: 866 LDRFCDAMIRIREEIRAVERGELDKEDNPLKNAPHTAAELLGE-WNHAYSREQAAYPLASLVEAKYWPPVGRVDNVYGDRNLTCSCPP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHIEC (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.760e-19 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +P SRE A P R K+W RVDNVYGDRNLICT P Sbjct: 859 LDRFCEAMLAIREEARAIEDGRMDKTNNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHILW (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.298e-19 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +P SRE A P R K+W RVDNVYGDRNLICT P Sbjct: 859 LDRFCEAMLAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHIL3 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.298e-19 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +P SRE A P R K+W RVDNVYGDRNLICT P Sbjct: 859 LDRFCEAILAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHIE6 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CIAT 652) GN=gcvP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.298e-19 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +P SRE A P R K+W RVDNVYGDRNLICT P Sbjct: 859 LDRFCEAMLAIREEARAIEDGRMDKINNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVY (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus (strain YJ016) GN=gcvP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19 Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IREE +++NG+ + NN L APH LM + W +P RE A P++ + +K+WP RVDNVYGDRNL+C+ Sbjct: 861 LDRFCDAMIAIREEMTKVKNGEWPLENNPLVNAPHTQVDLMEEQWDRPYPREIACFPSAATKRSKYWPTVNRVDNVYGDRNLVCS 945 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |