CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVU (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus GN=gcvP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19 Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IREE +++NG+ + NN L APH LM + W +P RE A P++ + +K+WP RVDNVYGDRNL+C+ Sbjct: 861 LDRFCDAMIAIREEMTKVKNGEWPLENNPLVNAPHTQVDLMEEQWDRPYPREIACFPSAATKRSKYWPTVNRVDNVYGDRNLVCS 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_HAHCH (Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis (strain KCTC 2396) GN=gcvP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19 Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IREE IENG+ D+ ++ L APH + L+GD W +P SRE P L+ K+W GR+DNVYGDRNL+C P Sbjct: 868 LDRFCDAMIAIREEIRAIENGEYDVDHSPLHHAPHTAADLVGD-WDRPYSRERGVYPLKALKADKYWSPVGRIDNVYGDRNLVCACPP 954
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.120e-19 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+CDALISIR+E +IE G NN+L APHP + + W +P +RE A P L+ KFWP+ R+D+ YGD+NL CT P Sbjct: 928 MDRFCDALISIRQEIREIEEGLQPKDNNLLVNAPHPQKDIASEKWDRPYTRERAVYPVPLLKERKFWPSVARLDDAYGDKNLFCTCSP 1015
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BORPA (Glycine dehydrogenase [decarboxylating] OS=Bordetella parapertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.120e-19 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 L+R+ +A+I+IR E AQIE+G+ D +NVL+ APH +L+ + W R+ AA P + LR K+WP RVDN YGDRNL+C LP Sbjct: 862 LERFIEAMIAIRAEIAQIESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BORBR (Glycine dehydrogenase [decarboxylating] OS=Bordetella bronchiseptica GN=gcvP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.120e-19 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 L+R+ +A+I+IR E AQIE+G+ D +NVL+ APH +L+ + W R+ AA P + LR K+WP RVDN YGDRNL+C LP Sbjct: 862 LERFIEAMIAIRAEIAQIESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SYNY3 (Glycine dehydrogenase [decarboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=gcvP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+I +E I +G+ D +N LK APH L+ W P S+E AA PA W + KFWPA GR++N YGDR+L+C+ Sbjct: 889 LDRFCDAMIAIYQEAQAITHGEIDPADNPLKNAPHTAQSLICGEWNHPYSQEEAAYPAPWTKQFKFWPAVGRINNTYGDRHLVCS 973
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I IREE +ENG D +N LK APH + ++G W+ P SRE A P L K+WP GRVDNV+GDRNL+C Sbjct: 861 LDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPHTAAEIVGQ-WSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVC 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSE14 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gcvP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I IREE +ENG D +N LK APH + ++G W+ P SRE A P L K+WP GRVDNV+GDRNL+C Sbjct: 861 LDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPHTAAEIVGQ-WSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVC 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BORPE (Glycine dehydrogenase [decarboxylating] OS=Bordetella pertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 L+R+ +A+I+IR E AQ+E+G+ D +NVL+ APH +L+ + W R+ AA P + LR K+WP RVDN YGDRNL+C LP Sbjct: 862 LERFIEAMIAIRAEIAQVESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_AGRVS (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=gcvP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C A+++IREE IE+G+ D NN LK APH L+G+ W +P SR+ A P R K+W + RVDNVYGDRNL+CT P Sbjct: 859 LDRFCTAMLAIREEARAIEDGRMDKTNNPLKNAPHTVEDLVGE-WDRPYSRDQACYPPGAFRVDKYWSSVNRVDNVYGDRNLVCTCPP 945 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |