CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_AKKM8 (Glycine dehydrogenase [decarboxylating] OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gcvP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.733e-19 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ +A+ I E I NG AD +NVLK +PH ++ D W P SR AA P S L KFWP GRVDNVYGDRNL+CT Sbjct: 851 LDRFIEAMERIHAEITAIINGTADKEDNVLKNSPHTAEMVSADEWRHPYSRSEAAYPVSGLLIHKFWPYVGRVDNVYGDRNLVCT 935
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SACD2 (Glycine dehydrogenase [decarboxylating] OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I IR+E + +E+G+ NN L APH + +TWT+P +R+ A P +L K WP R+DNVYGDRNLIC+ Sbjct: 870 LDRFCDAMIKIRQEASLVESGELPRDNNPLVNAPHTLDDALDETWTRPYTRDEATRPLPYLHAHKIWPTVNRIDNVYGDRNLICS 954
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ROSDO (Glycine dehydrogenase [decarboxylating] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gcvP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+++IR E A IE G+ D NN LK APH L+ D W +P SR+ P R K+WP RVDNV+GDR+L+CT P Sbjct: 854 LDRFCDAMLAIRAEIADIEEGRMDAANNPLKNAPHTVDDLVSD-WDRPYSRDQGCFPPGAFRVDKYWPPVNRVDNVFGDRHLVCTCPP 940
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RALSO (Glycine dehydrogenase [decarboxylating] OS=Ralstonia solanacearum GN=gcvP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR E Q+ +G D +N LK APH ++M D W+ +RE AA P + LR K+WP GR DNVYGDRNL C +P Sbjct: 888 LDRFIDAMIAIRGEVDQVISGAFDREDNPLKHAPHTAQVVMADDWSHRYTREQAAYPVASLRTRKYWPPVGRADNVYGDRNLFCACVP 975
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR E ++ +G+ D +N LK APH +++M D W+ +RE AA P + LR K+WP GR DNVYGDRNL C +P Sbjct: 885 LDRFIDAMIAIRGEVDKVISGEFDREDNPLKHAPHTAAVVMADDWSHKYTREQAAYPVASLRARKYWPPVGRADNVYGDRNLFCACVP 972
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_GRAFK (Glycine dehydrogenase [decarboxylating] OS=Gramella forsetii (strain KT0803) GN=gcvP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 48/88 (54.55%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDALISIR+E I+ D NNVLK APH +L D W P SRE AA P L KFWP+ RVD +GDRNL+CT P Sbjct: 858 LDRFCDALISIRKE---IDEVSVDDSNNVLKNAPHTIHMLTSDEWKLPYSREKAAYPLDHLHDNKFWPSVRRVDEAFGDRNLMCTCPP 942
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBPA (Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus GN=gcvP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.541e-18 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 L+R+CDA+ISIREE +++NG+ + NN L APH L + W +P SRE P+ + K+WP RVDNVYGDRNLIC+ Sbjct: 861 LNRFCDAMISIREEMTKVKNGEWPLENNPLVNAPHTQVDLSAEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICS 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VARPS (Glycine dehydrogenase [decarboxylating] OS=Variovorax paradoxus (strain S110) GN=gcvP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.541e-18 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR E ++E G +N LK APH + LM W P SRE A P + L+ AK+WP GRVDNVYGDRNL C+ +P Sbjct: 871 LDRFIDAMIAIRGEIRRVEEGVWPKDDNPLKHAPHTAASLMAAEWPHPYSRELGAFPLAELKLAKYWPPIGRVDNVYGDRNLFCSCVP 958
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSESM (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. tomato GN=gcvP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.541e-18 Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+CDA+I IREE +E+G D +N LK APH + ++G W+ P SRE A P L K+WP GRVDNV+GDRNL+C Sbjct: 861 LDRFCDAMIKIREEIRAVEDGTLDKDDNPLKNAPHTAAEIVGQ-WSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVC 943
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PROMT (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL2A) GN=gcvP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.541e-18 Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I IREE QI+ GK D NN LK +PH + D W +P SR+ AA P KFWP+ R++N YGDRNLIC+ Sbjct: 871 LDRFCDAMIGIREEIEQIKLGKIDPINNPLKQSPHTLKTVTSDDWDRPYSRKEAAYPLPDQEKYKFWPSVSRINNAYGDRNLICS 955 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |