CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBHB (Glycine dehydrogenase [decarboxylating] OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvP PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.318e-18 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IREE +++NG+ + NN L APH L + W +P SRE P+ + K+WP RVDNVYGDRNLIC+ Sbjct: 861 LDRFCDAMIAIREEMTKVKNGEWPLDNNPLVNAPHTQFDLAKEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICS 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PROM1 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL1A) GN=gcvP PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.318e-18 Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I IREE QI+ GK D NN LK +PH + D W +P SR+ AA P KFWP+ R++N YGDRNLIC+ Sbjct: 871 LDRFCDAMIGIREEIEQIKLGKIDPINNPLKQSPHTLKRVTSDDWDRPYSRKEAAYPLPDQEKYKFWPSVSRINNAYGDRNLICS 955
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SYNR3 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain RCC307) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ +A+++IR E A IE G D +N L+ APH + + D W +P SRE AA P LR K WPA R+DN +GDRNLICT Sbjct: 861 LDRFVEAMMAIRAEAAAIEAGLCDRDDNPLRRAPHTLAAVTADVWERPYSREQAAYPVQGLRSNKLWPAVSRIDNAFGDRNLICT 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SYNPX (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain WH8102) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ DA+I+IR E IE+G D NN LK APH + ++ + W +P SR+ AA P + K WPA R+DN YGDRNLICT Sbjct: 862 LDRFADAMIAIRNEIRDIESGAMDASNNPLKQAPHTMAAVIAEDWDRPYSRQQAAFPLPDQQQNKVWPAVARIDNAYGDRNLICT 946
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_STRMK (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P + L+ +K+WP RVDNVYGD+N++C +P Sbjct: 857 LDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASEWTHAYPRELAAFPLASLKQSKYWPPVARVDNVYGDKNVMCACIP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NITHX (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IR E A+IE G+ + + L+ APH + DTW++P SR PA R K+W GRVDN YGDRNL+C+ P Sbjct: 862 LDRFCDAMIAIRREIAEIEAGRWSVEASPLRHAPHTVHDIADDTWSRPYSRAQGCFPAGTSRLDKYWCPVGRVDNAYGDRNLVCSCPP 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18 Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE QIENG NN LK APH + +M W P SR+ A P W+ KFWP+ R+D+VYGDRNL C P Sbjct: 870 LDRFIGAMIAIREEIRQIENGVWTADNNPLKNAPHSQADVMDAEWKHPYSRQQAVFPLPWVAANKFWPSVNRIDDVYGDRNLNCACPP 957
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDALI+IR E +++NG+ + +N L APH + L + W +P SRE A P++ + +K+WP RVDNVYGDRNL+C+ Sbjct: 861 LDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAPHTQADLREEKWDRPYSREIACFPSAHTKASKYWPTVNRVDNVYGDRNLVCS 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDALI+IR E +++NG+ + +N L APH + L + W +P SRE A P++ + +K+WP RVDNVYGDRNL+C+ Sbjct: 861 LDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAPHTQADLREEKWDRPYSREIACFPSAHTKASKYWPTVNRVDNVYGDRNLVCS 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SYNS9 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain CC9902) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+ DALI+IR+E IE G D NN LK APH + +M + W +P SR+ AA P K WPA R+DN +GDRNLICT Sbjct: 863 LDRFADALIAIRDEVRAIETGAMDALNNPLKRAPHTMAAVMAEVWDRPYSRQQAAFPLPDQTQNKVWPAVARIDNAFGDRNLICT 947 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |