CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_STRM5 (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP RVDNVYGD+N++C +P Sbjct: 857 LDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASEWTHAYPRELAAFPLPSLKLQKYWPPVARVDNVYGDKNVMCACIP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+I+IREE +E+G++D +N LK APH ++++ + W +RE AA P L K+WP GR DNVYGDRNL C+ +P Sbjct: 886 LDRFIEAMIAIREEIRAVEDGRSDREDNPLKHAPHTAAVVIANDWKHAYARETAAYPLPTLIAKKYWPPVGRADNVYGDRNLFCSCVP 973
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPK (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas putida (strain KT2440) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLIC 253 LDR+C+A+I IREE +E+G D +N LK APH + L+G+ WT SRE A P + L K+WP GRVDNV+GDRNL+C Sbjct: 858 LDRFCNAMIQIREEIRAVEDGSLDKDDNPLKNAPHTAAELVGE-WTHGYSREQAVYPLASLVEGKYWPPVGRVDNVFGDRNLVC 940
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XANCP (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP GRVDNVYGD+N++C +P Sbjct: 878 LDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVGRVDNVYGDKNVMCACIP 965
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XANC8 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP GRVDNVYGD+N++C +P Sbjct: 878 LDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVGRVDNVYGDKNVMCACIP 965
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ +A+I+IREE +E G++D +N LK APH ++++ + W +RE AA P L K+WP GR DNVYGDRNL C+ +P Sbjct: 886 LDRFIEAMIAIREEIRAVEEGRSDREDNPLKHAPHTAAVVIANDWKHAYARETAAYPLPTLIAKKYWPPVGRADNVYGDRNLFCSCVP 973
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_ALISL (Glycine dehydrogenase [decarboxylating] OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+C+A+I+IREE +++ G+ + NN L APH LM + W P +RE A P+ + +K+WP RVDNVYGDRNLIC+ Sbjct: 862 LDRFCEAMIAIREEMNKVQQGEWPLDNNPLVNAPHTQVDLMSNEWDHPYTREVACFPSVQAKASKYWPTVNRVDNVYGDRNLICS 946
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_AGRRK (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+C A+++IREE IE G+ D +N LK APH L+G+ W +P SRE A P R K+W RVDNVYGDRNL+C+ P Sbjct: 859 LDRFCAAMLAIREEARAIEEGRMDKTDNPLKNAPHTVEDLVGE-WNRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCSCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PHOPR (Glycine dehydrogenase [decarboxylating] OS=Photobacterium profundum GN=gcvP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IR+E A+++ G+ I +N L APH + LM W + SRE A P R +K+WP RVDNV+GDRNLIC+ Sbjct: 865 LDRFCDAMIAIRQEIARVQEGEWPIDDNPLVHAPHTQADLMETEWNRAYSREIACFPTDHTRASKYWPTVNRVDNVFGDRNLICS 949
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURM1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C +P Sbjct: 883 LDRFIDAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCACVP 970 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |