CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLR-FAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+ISIR+E A IE G+ D N LK +PH + + W +P SRE AA P +++ +KFWP R+D++YGD++L+CT P Sbjct: 900 LDRFCDAMISIRQEIADIEEGRMDPQVNPLKMSPHTLNCVTSSKWDRPYSREVAAFPLPFVKPESKFWPTIARIDDIYGDQHLVCTCPP 988
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.151e-17 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IR+E +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DNVYGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWLHAYSREQAAYPVASLGTNKYWPPVGRADNVYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IR E A+IE G+ + + L+ APH L D W +P SR PA R K+W GR+DNVYGDRNL+C+ P Sbjct: 865 LDRFCDAMIAIRREIAEIETGRWKVEQSPLRFAPHTVHDLAEDHWHRPYSRAIGCFPAGTARHDKYWCPVGRIDNVYGDRNLVCSCPP 952
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURCJ (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURCH (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain HI2424) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURCA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURA4 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain MC40-6) GN=gcvP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLGTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XANOM (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=gcvP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP RVDNVYGD+N++C +P Sbjct: 880 LDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVARVDNVYGDKNVMCACIP 967 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |